Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lycaon_20pictus_20[genbank_20GCA_5F001887905.1_202016-12-01] 803 sequences; 2,358,143,818 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19 147 2e-30 seq33 136 3e-27 seq1 125 5e-24 seq34 113 3e-20 seq14 100 2e-16 seq35 91.5 1e-13 seq39 84.2 2e-11 >seq19 Length=38964370 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| |||| || |||| | || ||| Sbjct 5007384 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 5007325 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || |||||||||||||| | |||||| || | || | || ||||| ||| Sbjct 5007324 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 5007265 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | |||| | |||||||| || |||||||||| || || ||||| Sbjct 5007264 ATCTTCGCCTTGAC-GTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTT 5007206 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||||||||||||| ||||| Sbjct 5007205 ACCCGTCAAGGTCTTCACGAAGATCTGCAT 5007176 >seq33 Length=88276357 Score = 136 bits (150), Expect = 3e-27 Identities = 173/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTC-TCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 ||||||||| | | || | | |||||||| || || |||||| ||||||||||| | Sbjct 13711010 CATTCCCCCCCCTGAGGCGAAGGACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGT 13710951 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 ||| || || | | || |||||||| || | |||||||||||| | |||||| || | Sbjct 13710950 CGGACAGGGTGCACCCATCTTCCAGCTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAG 13710891 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 || | |||||||| ||| ||||| ||| | | ||| | |||||||| || Sbjct 13710890 GGGGGATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCGATGGTGTCATTGGGC 13710832 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||| ||||| ||||| || || | ||||||||||||||| |||||| Sbjct 13710831 TCCACCTCCAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATG 13710778 Score = 116 bits (128), Expect = 3e-21 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| | || |||| ||| || ||| ||||| ||||||||||| |||| Sbjct 13711233 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGGT 13711174 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || |||||||| || |||||||||||||| | |||||| || | || Sbjct 13711173 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAG-GGGG 13711115 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || ||||| |||||| ||| | ||| | |||||||| || ||||| Sbjct 13711114 ATGCCCTCTTTTTCTTGGATCTTC-CCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 13711056 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| || || | ||||||||| ||||| ||||| Sbjct 13711055 CTCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13711008 >seq1 Length=122647182 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| |||| || ||| | || ||| Sbjct 14843736 ACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCC 14843795 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || |||||||||||||| | |||||| || | || | || || ||||| Sbjct 14843796 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCTTGG 14843855 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | ||| | |||||||| || |||||||||| || || ||||| Sbjct 14843856 ATCTTC-CCTTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 14843914 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||||||||||||||| |||||| Sbjct 14843915 ACCAGTCAAGGTCTTCACGAAGATCTGCATG 14843945 >seq34 Length=88915096 Score = 113 bits (124), Expect = 3e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 44131 CAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAG 44190 |||||| || || ||| || |||||||||||||| | || ||| | || ||||| Sbjct 47887894 CAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAG 47887835 Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250 |||||| || |||||||| | | |||||| || | || | || || || ||| || Sbjct 47887834 CTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGAT 47887775 Query 44251 CTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 ||| ||||| || | |||||||| || |||||||||| || || ||||| || Sbjct 47887774 CTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 47887715 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||||||||| ||||| Sbjct 47887714 GGTCAGGGTTTTCACGAAGATCTGCAT 47887688 >seq14 Length=50855280 Score = 100 bits (110), Expect = 2e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || || ||||| | | ||||||| || || ||| || |||||||||| ||| | Sbjct 29349337 CCACCCCTCAGACGGAGAACCAGGTAGAGAGTTGACTCTTTCTGGATGTTGTCATCAGAA 29349278 Query 44170 -GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 |||| |||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 29349277 AGAGTGTGGC---CATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGG 29349221 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | || || || ||| ||||| ||||| || | |||||||| || ||| Sbjct 29349220 GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCATTGGGCTCC 29349161 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | || ||||| | || ||||||||||||||||| ||||| Sbjct 29349160 ACCTCCAGGATGATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 29349111 >seq35 Length=77559626 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || |||||||||||||| | || || | || ||||||||||| || |||| Sbjct 46120189 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCTTCCAGCTGCTTACCTGCAAC 46120248 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | | |||||| || | || || || || ||| ||||| ||||| | Sbjct 46120249 GATGAGCCTCTGCTGGTCAG-GGGGGTGCCCTCTTTATCCTGGATCTTGGCCTTCACATT 46120307 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||| || |||||||||| ||||| ||||| | || |||||||||| Sbjct 46120308 TTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCAGGTCAGGGTCTTCAG 46120367 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 46120368 GAAGATCTGCAT 46120379 >seq39 Length=123855249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCG 44178 ||||||||||| || ||| | ||| ||||||||| |||||||| || ||| | | || Sbjct 84732075 AGTCTCAACACAAGATGAGGAGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGT-ACG 84732017 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || ||||| ||||| || ||||| |||| | ||||||||| | ||| | ||||| Sbjct 84732016 GCCATCCTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGGATTCCTTC 84731957 Query 44239 CTTTTCCGTTATCTT 44253 ||| ||| ||||| Sbjct 84731956 CTTATCCAGAATCTT 84731942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986876931451