Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq56286 116 3e-21 >seq56286 Length=35121 Score = 116 bits (128), Expect = 3e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || |||||||| ||||| || || || ||||| || || ||||| Sbjct 17685 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 17744 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||||||||| || ||||| || ||||| ||||| ||||||||||| || Sbjct 17745 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTA 17804 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| ||||| || Sbjct 17805 CCTGTCTCTGTCTGAGACTCAATGATGGC 17833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445316900306400