Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq56286 87.8 3e-12 >seq56286 Length=35121 Score = 87.8 bits (96), Expect = 3e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | |||||| | ||||||| ||| || || || || | Sbjct 7650 CCTGCTTCCAGCCATAGAAGTGCATACTCGTAAGTTTGCCATAGTTAGGCTCAGCAATAT 7709 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||||| |||||||||||| || |||||| ||||| | || || ||||| |||| | Sbjct 7710 GGATGTTCAAAGACTGGCTTTGATCAATGAAA-GCGCCTCTTTCGGCTGCCATCTTGAGA 7768 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || ||||| || || |||||||| ||||| Sbjct 7769 ACAGTTTTCTGAGAGATTTCCCACACAGTCTT 7800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794353385375200