Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq56286 89.7 6e-13 >seq56286 Length=35121 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || ||||| ||||| || || |||||||||||||| ||||||| | |||| Sbjct 17823 AGTCTCAGACAGAGACAGGTACCCCGTACATGCTTTACAAAGATTCCTGTAATCGGAAGA 17764 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| |||| |||||| | |||||| || |||||||| | || | Sbjct 17763 GCAACCAGCAGAACCTGGGAACGATCAAATGCAGCAACCTGTGCACAGAAATAGTAGAGT 17704 Query 112414 TTACAGACAAAGATGAG 112430 ||| |||||||||| Sbjct 17703 ATACCAGCAAAGATGAG 17687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620116458882400