Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq257 98.7 1e-15 >seq257 Length=475938 Score = 98.7 bits (108), Expect = 1e-15 Identities = 180/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 |||| ||| | ||||||| || ||| | | || ||| | ||||| |||||||| Sbjct 92347 CCCGTTTCCTTACGATGCTCTCTGCAAAGTCCCCACGAAGTCCTGATTGTGACGTGGCAG 92406 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || | | ||||| | || ||||| |||| ||| | ||||| ||| || || ||| Sbjct 92407 AAAATCAGGGCTGTGAGCCCGGAAAACATGGTCACCTTCAGCAAGAACCATGGGGTTGTG 92466 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 || ||||| | ||| | || | | || || ||||| | || || ||| | Sbjct 92467 CTCCAGCCTGCCTATGAGGACAAGGTGAACATCACCGAGCTGGGACTCCATAACTCAACC 92526 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| | || ||||||||||| |||||||| | ||| || || |||| Sbjct 92527 ATTACCTTCTGGAATACCACCCTGGATGATGAGGGCTGTTACAAGTGCCTCTTCAATACC 92586 Query 153985 TTCGGTTCTGGTAAGGTATCGGGA 154008 || |||||||| ||| | || ||| Sbjct 92587 TTTGGTTCTGGGAAGATCTCAGGA 92610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648644462919200