Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq14723 95.1 4e-14 >seq14723 Length=264057 Score = 95.1 bits (104), Expect = 4e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| ||||| || || ||||||| ||||| ||||| Sbjct 56105 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCAATGAGCCCCTCACGACCCCCCATGGCATG 56164 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | |||| |||| || || ||||| Sbjct 56165 GAAGAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAATTCTCCACAAAGCCACGACT 56224 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||||||| || ||| |||| | || || ||||| |||| || || | || |||| Sbjct 56225 CTCGGGCCCATAGTCATCCTTGATGAAATGGGGCAGAGTCCGGTGCTTGAACCCAAATGG 56284 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||| ||||| || || || |||||||| || Sbjct 56285 GATCCGCTTGCCCTCCACATTCTGCTGCCC 56314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470296352325790