Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq2174 100 3e-16 >seq2174 Length=247496 Score = 100 bits (110), Expect = 3e-16 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||| ||||| | ||| |||| ||| |||| || || || Sbjct 112002 TCCAGCATATGGGGACCGACCTGTGATGGTCTCGATCGCATCGTTGAGCGCTGCGATTTG 112061 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || ||||| |||||| | | |||||||||||||| ||||||| || | | Sbjct 112062 CCGGAGATGCACGTGGGTGACTGGATGCTCTTTGAAAACATGGGTGCTTACA-CTGTGGC 112120 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCA 21274 ||| |||| || || |||||||||| | |||| Sbjct 112121 TGCTGCTTCCACTTTCAACGGCTTCCAGAGGCCA 112154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463078172205600