Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1598 86.0 1e-11 >seq1598 Length=210606 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | |||| ||||| | || || || || ||||||||||| || || ||| Sbjct 27148 TGGTGGTACTTTGTATCGAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 27089 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || || || || || || |||||||| | ||| |||||||| | Sbjct 27088 AAGAAAAACAACCAAGTCTCTTTCCTTCATGTGTATCATCACTGTACAATGTTTACACTG 27029 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| ||||||| || || Sbjct 27028 TGGTGGATTGGGATTAAGTGGGTTGCAGGGGGCCA 26994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902500222731200