Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25256 86.0 1e-11 >seq25256 Length=205224 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || |||||||| || || ||| || || |||||||| || || ||| Sbjct 45101 AAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAGCAGAGGCTTATCTTTGCTGGCAAG 45160 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| | ||| | | ||||||||| ||||||||||||| || || ||| Sbjct 45161 CAGCTGGAGGATGGCCGCACTCTCTCTGATTACAACATCCAGAAAGAGTCGACCCTGCAC 45220 Query 206374 CTTGT 206378 || || Sbjct 45221 CTCGT 45225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180599288487070