Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq14347 91.5 2e-13 >seq14347 Length=195022 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| |||| || || | || ||||| || ||||| || | | || | ||| | | Sbjct 106219 AGATAGTTGATGGAGAGATGTATCCTCCCACAGTCAAAGATACTCAGGTCAAGATGATCT 106160 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||| || ||| | | | || || |||| | ||| | ||||| || | Sbjct 106159 ACCCGCCTCACGTCCCTGAACATCTGCAGTTTGCTGTGGGCCAGGAGGTCTTTGGCCTGG 106100 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| |||| |||| || ||||| | || || ||||| || || || | Sbjct 106099 TGCCTGGTCTGATGATGTATGCCACAATTTGGCTTCGGGAACATAACAGAGTATGTGATG 106040 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 | || ||||||||||| || |||||| |||| || ||| | ||||||| Sbjct 106039 TACTTAAACAAGAGCATCCAGAATGGGACGATGAGCAGTTATTCCAGA 105992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722611401220800