Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq61647 84.2 5e-11 >seq61647 Length=2865 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 210921 TGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAAGAC 210980 |||||| | ||||||||| ||||||||||| | | | || ||| ||||||||||||| Sbjct 1644 TGGCGGAGGCGGTGAGATTCGAACTCACGGAAGGATCACTCCTTCGCCGGTTTTCAAGAC 1585 Query 210981 CGTTGCATTAAACCGCTCTGCCAC 211004 || ||| ||||||||||| ||||| Sbjct 1584 CGGTGCCTTAAACCGCTCGGCCAC 1561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1112679162302160