Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6471 199 1e-45 seq44690 188 2e-42 seq15362 152 2e-31 seq353 147 7e-30 seq9362 134 4e-26 seq26811 125 2e-23 seq15361 125 2e-23 seq6800 120 9e-22 seq3359 104 7e-17 seq209 98.7 3e-15 seq25256 96.9 1e-14 seq6774 87.8 5e-12 >seq6471 Length=258160 Score = 199 bits (220), Expect = 1e-45 Identities = 743/1147 (65%), Gaps = 21/1147 (2%) Strand=Plus/Plus Query 349190 aaaaaaaCCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAA 349249 ||| ||| |||||||| ||||| | ||||| || || || || || | || | ||| Sbjct 12338 AAAGAAATGGCTATAGGCATCGACATGGGTACCACCTACTCATGCGTGGGGGTGTTCCAA 12397 Query 349250 AATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTT 349309 || | || || || ||||| ||||| || || ||| | || || || ||||| Sbjct 12398 AACGGCAAGGTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTACGTG 12457 Query 349310 GCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAAT 349369 | || ||||| || ||| | | || || | | || || || || | || ||| Sbjct 12458 GTGTTCACCGACACCGAGTGGCTTATCGGGAAAGCGGCCAAGAACCAGGTAGCCATGAAT 12517 Query 349370 CCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCT 349429 || | || || | |||||||| || || || || || || | ||| ||| | | Sbjct 12518 CCCCAGAACACTGCCTTTGATGCCAAACGTCTGATCGGCAGGAAATTTAATGATCC-TGT 12576 Query 349430 ACA-CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACC 349488 | ||||| ||| | |||| || |||||| | | || | || || | || || Sbjct 12577 AGTTCAATCAGATATGAAACTTTGGCCTTTT-CAAATAATC--AGTGAAGGAGGCAAGCC 12633 Query 349489 AATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCAT 349547 | | ||| |||||||| ||| ||||| ||| || || || ||||| || | Sbjct 12634 CAAGGTACTGGTGTCCTATAAAGG-GAAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTT 12692 Query 349548 CAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTG 349607 | ||||| | |||||||||||| | |||||| || | ||| | | | | || Sbjct 12693 CCATGGTACTGACTAAAATGAAGGAGACTGCTGAGGCTTTTTTGGTCCACCCTATCACCA 12752 Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| || ||||| ||||||||||| | ||| | || | ||||| || |||| Sbjct 12753 ATGCTGTGATCACTGTGCCAGCCTATTTCAGTGACTCACAACTACAGGCAACTAAGGATG 12812 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | |||| |||||||| | ||||| |||||||| || ||||||||||| ||||| || | Sbjct 12813 CAGGCATGATTGCGGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCA 12872 Query 349728 TTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAG 349787 |||| ||||| | |||||| || | ||| | || | || || ||||| | | Sbjct 12873 TTGCCTATGGCTTAGATAAAGCAGGTTAGGGAGAGCGACATGTCCTGATCTTTGACCTTG 12932 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 |||| || || |||||||| || | || || | || || || |||||||| || || | Sbjct 12933 GTGGAGGCACATTTGATGTGTCCATCCTCACCATAGATGATGGGATTTTTGAGGTAAAGG 12992 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT 349907 | | ||||| || || || || | |||||| || ||||| ||| | || || || | Sbjct 12993 CCGCAGCTGGGGACACCCACCTGGTTGGAGAGGACTTTGACAATAGGCTAGTGAGCCACT 13052 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAG--CAA 349964 |||| | || || ||| | |||| | | || ||| | | || | || | | | Sbjct 13053 TTGTGGAGGAGTTCAAGAG-GAAGCAGAGGAAGGACATTAGCCAGAA--CAAGTGGTCCA 13109 Query 349965 TGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAA 350024 || | || ||| | || | ||||| | || ||| | || | || || | |||| Sbjct 13110 TGAGGCGGCTATGCACGGACTGTGAGAGGGCCAAGAGGACCCTGTCGTCCAGCACCCTGG 13169 Query 350025 CCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA----TCTATTACA 350080 || | ||||||||||| ||| ||| || | || |||| || || || || Sbjct 13170 CCAACTTAGAAATTGATTCACTTTATGAAGGGATTGACTTCTACACATCATTCCATCACC 13229 Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAA 350140 | || | |||||| || || ||| || || ||||| | || |||| ||||||| | Sbjct 13230 AGAGCCCAGTTTGAGGAGTTGTGTGCAGACCTGTTTAGGGGCACCCTGGAGCCTGTGG-A 13288 Query 350141 AAAGTAT-TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGG 350199 |||| | | ||||| || ||| | | | || ||| | |||||||| || Sbjct 13289 GAAGTCTCTTTGGGATGCCAAGATGGATACGGCTAAAATCCATGGTATTGTTTTAGTGGG 13348 Query 350200 TGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGA 350259 || || || || || || || ||||| || | || || | ||||| ||| | || Sbjct 13349 GGGCTCCACCCGCATCCCTAAGGTTCAGAAGCTGCTGCAGGATTACTTTAACGGCCATGA 13408 Query 350260 AC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCAT 350318 | | | ||| | || || || ||||| || || || || || ||||| || ||||| Sbjct 13409 TCTCAACAAGAGC-ATCAACCCCGATGAGGCAGTAGCCTACGGGGCTGCAGTACAGGCTG 13467 Query 350319 CTATTTT 350325 | ||||| Sbjct 13468 CCATTTT 13474 >seq44690 Length=446859 Score = 188 bits (208), Expect = 2e-42 Identities = 366/535 (68%), Gaps = 4/535 (1%) Strand=Plus/Plus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 ||||| ||||| ||||| ||||| ||||||||||| || | || || ||||||| ||| Sbjct 423588 CTTATCTTTGACTTAGGAGGTGGCACTTTTGATGTGTCCATCCTCACTATTGAAGATGGA 423647 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || ||||| || ||| | || ||||| || || || | ||||||||||||||||| || Sbjct 423648 ATCTTTGAGGTCAAATCTACAGCTGGAGACACCCACTTAGGTGGAGAAGATTTTGACAAC 423707 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGA 349950 || | || ||||| || || || ||||| ||||| ||| | || || | || Sbjct 423708 CGAATGGTCAACCATTTCATTGCCGAGTTCAAGCG-CAAGCATAAGAAGGACATCAGTGA 423766 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 || || || | ||||| || | ||||| ||||| || ||||| || | | || Sbjct 423767 GAACAAGAGGGCTGTCCGTCGTCTCCGCACTGCTTGTGAGCGGGCTAAACGCACGCTCTC 423826 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | |||||| || |||||| ||||| || || ||| || | ||||||| | | Sbjct 423827 TTCCAGTACCCAGGCCAGTATTGAGATTGACTCACTCTATGAAGGAATTGATTTCTATAC 423886 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || ||||| ||||| ||||||||||| | | || || || | | || |||| Sbjct 423887 CTCCATTACCCGTGCCAGGTTTGAAGAACTCAATGCTGACCTATTCCGTGGCACTCTGGA 423946 Query 350131 TCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGT 350190 ||| ||||| |||| | ||||| || | |||| ||||| |||| | || Sbjct 423947 TCCCGTGGAGAAAGCCCTGCGGGATGCTAAGCTAGACAAATCCCAGATCCATGATATTGT 424006 Query 350191 TTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAA 350250 |||| ||||||||||| || || || || |||| | | || || || || || Sbjct 424007 CCTAGTAGGTGGTTCTACCCGAATCCCCAAGATTCAGAAACTTCTGCAGGACTTCTTCAA 424066 Query 350251 TGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 ||| ||||| | | ||| | || || || ||||| |||||||| |||||||| Sbjct 424067 TGGAAAAGAGCTGAATAAGAGC-ATCAACCCTGATGAGGCTGTTGCTTATGGTGC 424120 Score = 118 bits (130), Expect = 3e-21 Identities = 347/530 (65%), Gaps = 6/530 (1%) Strand=Plus/Minus Query 183264 GCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAA 183323 |||||||| |||||||| ||||| ||||| || | | ||||| ||||| || Sbjct 424120 GCACCATAAGCAACAGCCTCATCAGGGTTGATGCTCTTATTCAGCTCTTTTCCATTGAAG 424061 Query 183324 AATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACT 183383 || || || | || ||||| || || |||| || |||||||| |||| || | Sbjct 424060 AAGTCCTGCAGAAGTTTCTGAATCTTGGGGATTCGGGTAGAACCACCTACTAGGACAATA 424001 Query 183384 TCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCAT 183442 |||| ||| | ||| ||| || | ||| | |||| || || || |||| Sbjct 424000 TCATGGATCTGGGATTTGTCTAGCTTA-GCATCCCGCAGGGCTTTCTCCACGGGATCCAG 423942 Query 183443 AGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaa 183502 ||| | |||| || | | ||||| || || || | || | || | | | Sbjct 423941 AGTGCCACGGAATAGGTCAGCATTGAGTTCTTCAAACCTGGCACGGGTAATGGAGGTATA 423882 Query 183503 aaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAA 183562 || ||||| || | ||| | || ||||| ||||| | || ||| || || | Sbjct 423881 GAAATCAATTCCTTCATAGAGTGAGTCAATCTCAATACTGGCCTGGGTACTGGAAGAGAG 423822 Query 183563 TGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGA--TCTTGGATTATCT 183620 || | |||||| || ||||| || || | || ||||| | | ||||| || || Sbjct 423821 CGTGCGTTTAGCCCGCTCACAAGCAGTGCGGAGACGACGGACAGCCCTCTTG--TTCTCA 423764 Query 183621 GTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTA 183680 | || || | ||||| || | || || || | ||| ||||| | | | || | Sbjct 423763 CTGATGTCCTTCTTATGCTTGCGCTTGAACTCGGCAATGAAATGGTTGACCATTCGGTTG 423704 Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 ||||||||||| |||||||| || || || ||||| |||| ||| || ||||| ||||| Sbjct 423703 TCAAAATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTAGATTTGACCTCAAAGATTCCA 423644 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||||||||| | | || || |||||||| || ||||| || || ||||| Sbjct 423643 TCTTCAATAGTGAGGATGGACACATCAAAAGTGCCACCTCCTAAGTCAAA 423594 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| | |||||||| || ||||| ||||| | |||||| ||||| ||||||| Sbjct 423331 ATGCTGTTGTCACTGTACCTGCTTATTTCAATGACTCTCAGCGTCAGGCAACCAAAGATG 423390 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| || | ||||| || || || || ||||| || |||||||| || | Sbjct 423391 CTGGAACTATTGCTGGTCTCAATGTACTCAGGATCATCAATGAGCCAACTGCTGCTGCTA 423450 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| | || |||| Sbjct 423451 TTGCTTATGGCTTAGACAAAA 423471 Score = 84.2 bits (92), Expect = 7e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || || || || |||||||| | ||| | || | | || ||| Sbjct 422376 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAA 422435 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 |||||||| |||||||| || ||| |||| || ||| || || || ||||| || || Sbjct 422436 ATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTACTGATACC 422495 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || || |||| |||||| |||| || || |||| ||| || || | || |||||| Sbjct 422496 GAACGATTGATCGGTGATGCTGCCAAGAACCAAGTTGCAATGAACCCCACTAACACGGTT 422555 Query 349385 TTTG 349388 |||| Sbjct 422556 TTTG 422559 >seq15362 Length=836705 Score = 152 bits (168), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 || ||||| | ||| | | |||||||| ||||||||| |||||||| || || ||||| Sbjct 451496 ACTACCACAAAGTCTGAATATAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAGTCAGA 451555 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA----TTAGACGTTGCTGATCAG 140625 || || | |||||||| || | || |||||||||| | || | | ||| |||| Sbjct 451556 CAAAGTATGTCCATCTTCCAGCTAATTGCCAGCAAAGATCAGTCAGTCTTCACTGTTCAG 451615 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||||||||||||| ||| ||||||| || | ||||||||| || | | ||| | |||| Sbjct 451616 GAGGAATTCCTTCCTTAACCTGAATCTTGGTTTTTACATTTTCTGTTGTATCCAAGGGTT 451675 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || || ||| ||||||| || ||||| | ||||||||||| Sbjct 451676 CAACCTTGAGAGTGACGGTC-TTCCGGTAAGGGTTTTCATGAAAATCTGCAT 451726 >seq353 Length=562904 Score = 147 bits (162), Expect = 7e-30 Identities = 169/226 (75%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 140512 CACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATA 140571 |||||| ||||| | ||||| |||||| |||||| |||||||| || || ||||| | Sbjct 101317 CACCACAAAATCTCAACACAAGGTGAAGAACAGACTCCTTTTGAATGTTGTAGTCAGACA 101376 Query 140572 ATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAA 140631 | || | |||||||| ||||| || |||| ||| |||| | |||| ||||| ||||| Sbjct 101377 AAGTACAGCCATCTTCCAGTTGCTTGCCAGTAAACATTACTC--TGCTCATCAGTAGGAA 101434 Query 140632 TTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTT 140691 ||||||| |||||||| || || || |||||||| || | | ||| | |||||||| | Sbjct 101435 TTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCCCAGGGTTCAACCT 101494 Query 140692 CAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | || ||| |||||||||||||| Sbjct 101495 TGAGAGTGGCTGTC---CCTTTAAGGATTTGCACAAAAATCTGCAT 101537 >seq9362 Length=45889 Score = 134 bits (148), Expect = 4e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 |||||||||||||| ||||| | ||||| || | |||||| | || | ||||||| Sbjct 23835 ACAAGATGAAGAGTGGACTCCTACTGAATGTTGCAGTCAGATGAAGTACATCCATCTTGC 23776 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 || || | ||| ||||||||| | |||||||| ||||| ||||||||| |||| ||| Sbjct 23775 AGCTGCTGGACAGGAAAGATTAGTCTTTGCTGATTAGGAGAAATTCCTTCCTTATGCTGG 23716 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 || || || |||||||| || || | ||| | ||||||| |||| |||| ||||| Sbjct 23715 ATCTTGGCCTTTACATTTTCTATTGTATCTAAAGGTTCAATCTCAAAAGTAATGGTCTTC 23656 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | ||| ||||||| Sbjct 23655 CCTGTAAGGGCTTCCATGAAACTCTGCAT 23627 >seq26811 Length=67355 Score = 125 bits (138), Expect = 2e-23 Identities = 157/211 (74%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||||||||| |||| |||||||| || || || || || || | |||| ||| | Sbjct 59312 CAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCGGACAAAGTATGTCCATTTTCCA 59253 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || |||||||| || | ||||||||||||||||||||||| |||| ||| | Sbjct 59252 GCTGCTTGCCGGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTTCTTATTCTGGA 59193 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAG--TGT-AACTGTCT 140706 | || || |||||||| || | | ||| || |||||| | | ||| ||| || || Sbjct 59192 TCTTGGCCTTTACATT-TCTGTTGTATCTGAGGGTTCAGCCTAAAGAATGTGGAC---CT 59137 Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || ||||| | ||||| | ||| Sbjct 59136 TCCCTGTAAGGGTTTTCATGAAAATATACAT 59106 >seq15361 Length=270988 Score = 125 bits (138), Expect = 2e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 140522 TCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCC 140581 ||| || | |||||||||||| ||||| |||||| | || | ||||| || || | | Sbjct 65915 TCTCAGTATAAGATGAAGAGTGGACTCCTTTTGAGTGTTCTTGTCAGACAAAGTATGTCT 65974 Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641 |||||| || || || ||||||||||| || | |||||||| |||||||||| ||| || Sbjct 65975 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTATTTCCTT 66034 Query 140642 ATCCTGAATTTTAGCTTTTACATTATC 140668 |||||| || ||||| |||||||| || Sbjct 66035 ATCCTGGATCTTAGCCTTTACATTTTC 66061 >seq6800 Length=71777 Score = 120 bits (132), Expect = 9e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| |||||||| ||||||||||| ||||| ||||||||||| || ||| ||| | Sbjct 55156 CAGCCTGAACAGCAGCACCATATGCTACAGCCTCATCTGGGTTTATGCCACGGGATGGCT 55097 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| || || ||| || || ||||||||| ||||| |||| ||| || |||| Sbjct 55096 CCTTGCCATTGAAGAACTCTTTAACCAGTTGTTGAATCTTTGGGATTCGAGTAGAGCCAC 55037 Query 183370 CGACTAATACTACTTCATCGATAT 183393 |||| | || | |||||| |||| Sbjct 55036 CGACAAGAACAATTTCATCAATAT 55013 Score = 100 bits (110), Expect = 9e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 ||||||||| | ||| | || ||||| ||||| || || ||||| ||||||| | | Sbjct 55015 ATTGATGAAATTGTTCTTGTCGGTGGCTCTACTCGAATCCCAAAGATTCAACAACTGGTT 55074 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || |||||||| || || || | || || |||||||| ||||| ||| Sbjct 55075 AAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCAGATGAGGCTGTAGCA 55134 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||||||||||||||| Sbjct 55135 TATGGTGCTGCTGTTCAGGC 55154 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| || ||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct 54241 ATGCAGTAGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACCAAAGATG 54300 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||| | ||||| || || |||||| | || || || ||||| || Sbjct 54301 CTGGAACTATTGCTGGATTGAATGTTATGAGGATAATCAATGAGCC 54346 Score = 89.7 bits (98), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || || || || ||||| ||||| || || || ||| || || || || || || Sbjct 54433 ACAGCAGCTGCTATTGCTTATGGCCTGGACAA---GAGGGAAGGGGAGAAGAACATCCTG 54489 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | |||||| | |||||||| || || ||||| || || ||||| |||| | || | Sbjct 54490 GTGTTTGATCTGGGTGGTGGAACCTTCGATGTGTCTCTTCTAACCATTGATAACGGTGTC 54549 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || ||| ||| ||||| ||||| ||||||||||| ||||| Sbjct 54550 TTTGAAGTTGTGGCCACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGA 54602 >seq3359 Length=99056 Score = 104 bits (114), Expect = 7e-17 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 ||||||||||| || ||||| || || || |||||||| || ||||| ||||||||||| Sbjct 65234 TTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGATC 65175 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCT 140636 || | |||||||||||||||||||||| Sbjct 65174 AGTCTTTGCTGATCAGGAGGAATTCCT 65148 >seq209 Length=76019 Score = 98.7 bits (108), Expect = 3e-15 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 140522 TCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCC 140581 ||||| ||||| |||||||| | || |||||||| | || ||||| ||| | ||| Sbjct 73808 TCTTAACACAAGGTGAAGAGTGGGCTTCTTTTGAATGCTGTAGTCAGACAATTATGTCCC 73749 Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641 |||| ||||| || |||||||||| || | ||||| ||| ||||||||||| || Sbjct 73748 -TCTTTCAGTTGCTTGCCAGCAAAGACCAGTCCTTGCT-ATCTTCTGGAATTCCTTCCTT 73691 Query 140642 ATCCTGAATTTTAGCTTTTACA-TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAA 140700 |||||| || || | ||||| || | || | ||| |||| |||||| | | | | Sbjct 73690 ATCCTGGATCTTGGTCCTTACATTTTTTTATTGTATCTGATGTTTCAACCTTGGGAATGA 73631 Query 140701 CTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || |||| | || | |||||||||||||| ||| Sbjct 73630 -TGGTGTTCCTCTAAGGGATTTTACAAAAATCTACAT 73595 >seq25256 Length=205224 Score = 96.9 bits (106), Expect = 1e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || |||||||| || || || |||||||| | || || ||||| Sbjct 45228 AGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCC 45169 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || ||||| || |||||||||||| Sbjct 45168 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 45109 Query 140646 TGAATTTTAGC 140656 || || || || Sbjct 45108 TGGATCTTGGC 45098 >seq6774 Length=106334 Score = 87.8 bits (96), Expect = 5e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 54812 GATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAGGT 54871 |||||||| || ||||||||||| ||||| ||||| ||| | || | || ||||| ||| Sbjct 69236 GATGATATGTTCCATTGGCAAGCTACAATAATGGGGCCAAATGACAGTCCCTATCAGGGT 69295 Query 54872 GGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATGTA 54931 || ||||| || | | || |||| | | |||||| || || ||||| || || || Sbjct 69296 GGAGTATTTTTCTTGACATTTTATTTCCTAACAGATTACCCCTTCAAACCACCTAAGGTT 69355 Query 54932 GTTTTTACTACAAAGATTTATCA 54954 | ||||| |||| |||| ||| Sbjct 69356 GCATTTACAACAAGAATTTGTCA 69378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1513688256728010