Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq60877 87.8 6e-13 >seq60877 Length=3345 Score = 87.8 bits (96), Expect = 6e-13 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40174 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40233 |||||||||||| | ||||||||| || || || || || |||||||| || ||||| | Sbjct 1892 GAAGTCGATGTCGAAGTCGGGCATCGAGACCCGTTCCGGATTCAGGAAACGTTCGAACAG 1951 Query 40234 GAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACC 40293 || || || |||||||||||||| | ||||| ||| || ||||||||||| Sbjct 1952 CAGGTTGTAGCGGAGCGGATCGAGGTCGGTCACGCCGAGCGCGTACGCAACCAGCGAACC 2011 Query 40294 GGCTGCCGAGCCTCGCCC 40311 || |||| || || || Sbjct 2012 TGCGCCCGAACCCCGGCC 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160252737686580