Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq60877 91.5 5e-14 >seq60877 Length=3345 Score = 91.5 bits (100), Expect = 5e-14 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 39031 CCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATCGAAGTCGATG 39090 ||||| || || | |||||| | ||||| | | |||| | | | |||||||||| Sbjct 1842 CCGTATTTGTCTTTCACGTACTGAATCACACGGTCGCGGCCGTGCTGACAGAAGTCGATG 1901 Query 39091 TCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGA 39150 || | ||||||||| ||||| || || || |||||||| || ||||| | || || Sbjct 1902 TCGAAGTCGGGCATCGAGACCCGTTCCGGATTCAGGAAACGTTCGAACAGCAGGTTGTAG 1961 Query 39151 GGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGC 39203 ||| || || |||||||| | ||||| |||||||| ||||||| || || Sbjct 1962 CGGAGCGGATCGAGGTCGGTCACGCCGAGCGCGTACGCAACCAGCGAACCTGC 2014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159562199825940