Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5645 167 2e-36 >seq5645 Length=125407 Score = 167 bits (184), Expect = 2e-36 Identities = 136/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || | |||||||||||||| |||||| Sbjct 12048 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 11989 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||||||||||||||||||||| |||||||| || ||||| || | | Sbjct 11988 ACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 11929 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 ||||| ||||| || | ||||||||| ||||| |||||||||||| Sbjct 11928 ACGTAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAGA 11884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405763874303620