Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20javanica_20[refseq_20GCF_5F001685135.1_202016-07-14] 80,670 sequences; 2,547,395,906 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq60877 82.4 2e-11 >seq60877 Length=3345 Score = 82.4 bits (90), Expect = 2e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 40166 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40225 |||||||||||| | ||||||||| || || || || || |||||||| || ||||| | Sbjct 1892 GAAGTCGATGTCGAAGTCGGGCATCGAGACCCGTTCCGGATTCAGGAAACGTTCGAACAG 1951 Query 40226 GAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACC 40285 || || ||| || || ||||| || | |||||| ||| || ||||||||||| Sbjct 1952 CAGGTTGTAGCGGAGCGGATCGAGGTCGGTCACGCCGAGCGCGTACGCAACCAGCGAACC 2011 Query 40286 GGCAGCCGAGCCACGTCC 40303 || |||| || || || Sbjct 2012 TGCGCCCGAACCCCGGCC 2029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159987392119760