Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq506 172 4e-38
seq18694 107 1e-18
seq8905 89.7 4e-13
>seq506
Length=326277
Score = 172 bits (190), Expect = 4e-38
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 26948 GTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAA 27007
||| |||||||| || || || |||||||| |||| ||| ||||||||||| |||| ||
Sbjct 133562 GTGGACAATGGGCGTGACACAGGTGCAGCCCACAGCCACCAGCATCTTCTCCAGCCGGAA 133621
Query 27008 TGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGAC 27067
|| | |||||| | || || | | |||| || || |||||||| ||||| |||||
Sbjct 133622 GGAGTGGGGGCAGTGCCGAGGCTCCCTTCGCAGGACCAGGATCTCTTGCTGGATGGGGAC 133681
Query 27068 TGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTT 27127
|||||||||| || |||||| ||||| ||||| | || || || |||| ||| |||||
Sbjct 133682 GGAGTTCATGTCGTGGTCTACCTTCCCTTCAGCGCTGACGCAGCCGAAGTGGCGGCACTT 133741
Query 27128 TGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172
|| ||||| ||||||||||| ||||| || | || || |||||
Sbjct 133742 GGCCTCCCAGATCACAGAGGGGTATCTCTCCGGGTCCTCGTTGCG 133786
>seq18694
Length=30974
Score = 107 bits (118), Expect = 1e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| ||||| | |||||||| | ||||||||| |||||||| || ||||| |||||
Sbjct 25091 CTTGAGTTCTCTACTGAGAACTATGTTAATTCTGTTCTTTAAAGGTCGATTCTTTTCAGG 25032
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
|| |||||||| ||||| ||||||||||||| |||||||||||| ||
Sbjct 25031 AAGGGAGAACCATGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 24983
>seq8905
Length=76272
Score = 89.7 bits (98), Expect = 4e-13
Identities = 92/119 (77%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 4166 TATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCT 4225
|||| | |||||| | ||| || | | | ||||||||||||||||||| |||||||| |
Sbjct 39845 TATAAAAAGAACTGCTTCCTATGAGCTAAACCATGTCTACTTTATTTGTTAATTCTGATT 39786
Query 4226 GTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284
| || |||| ||||| |||||||| | | | || || | ||||| ||||| ||||||
Sbjct 39785 GCTCAATAAG-TTTAAGGCATCATCCACATTTTTGGCAAGAAAATCAGCTCCTTGTGGA 39728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360842748169772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |