Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq24084 334 9e-87
seq8719 170 2e-37
seq3181 165 1e-35
>seq24084
Length=17035
Score = 334 bits (370), Expect = 9e-87
Identities = 593/858 (69%), Gaps = 9/858 (1%)
Strand=Plus/Minus
Query 176387 TGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAA 176446
|||| || |||||||| | | ||| || | || ||| || ||||| || | || |
Sbjct 9219 TGGGCTGCTGGGCAATGTGGTGGTGCTGGTGATCCTCACAAAATACAAGAGGCTCCGGAT 9160
Query 176447 CCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTT 176506
| || ||||| | ||| | || ||||| || ||||||||||| ||||| || ||| |
Sbjct 9159 TGTGACCAACATCTACCTGCTTAATTTGGCGATTTCTGACTTGCTCTTTCTGTTCACTCT 9100
Query 176507 GCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTG 176566
||| || ||||| |||||| | || || | |||| ||| ||||| | ||||
Sbjct 9099 GCCGTTCTGGATTCACTATGT-GGCGTGGA--ATGAGTGGGTCTTTGGCCACCGCGTGTG 9043
Query 176567 TAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCT 176626
||| | ||| || | | ||| || |||||||| || |||| | |||||||||
Sbjct 9042 TAAGTTCCTCTCAGGGCTTTATTATCTGGGCTTGTACAGCGAGATCTTCTTCATCATCCT 8983
Query 176627 GCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAAC 176686
||| || ||||| |||| || || | ||| | || || || | | ||||
Sbjct 8982 GCTGACGATAGACCGGTACCTGGCCATCGTCCACGCCGTGTTCGCCCTTCGAACCCGAAC 8923
Query 176687 AGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCT 176746
|||| | |||||| | ||| | | | || ||| ||||||||| | ||||
Sbjct 8922 TATAACATTTGGCATGGCAACCAGCATCTTCACATGGGGCCTGGCAGGGCTAGCAGCCCT 8863
Query 176747 CCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTA 176806
||| |||||| |||| || | |||||| || ||| | | | ||| ||||
Sbjct 8862 CCCGGAATTTATCTTCCACGAGTCCCAAGAGGATTTTGGAAAGCCTGTGTGCAGTCCTCT 8803
Query 176807 CTACCCAGAGA-TGTCTACAAATGTTTGGAGGCGCGCCCACGT--TGCAAAGGTGATTAT 176863
|||||||| | || | ||| |||| || |||||| ||| || ||| |||
Sbjct 8802 TTACCCAGAAAATGAAGA-AAACACCTGGAAGCATTTCCACGTGCTGCGAA--TGAATAT 8746
Query 176864 GTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAG 176923
|| ||||| ||||||||||| |||||||||||||||||| | ||| |||| ||
Sbjct 8745 CTTGGGTCTCGCCCTGCCTCTGCTCGTTATGGCTGTCTGCTACTCAGGAATCATCAAAAC 8686
Query 176924 ACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCAT 176983
||| |||| | ||||| || |||||||||||||| ||| ||||||| |||||||||||
Sbjct 8685 GCTGCTGAGATGTCCCAGTAAAAAGAAGTACAAGGCTATCCGGCTCATTTTTGTCATCAT 8626
Query 176984 GGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 177043
||||| || ||| |||| |||||||| |||||| | |||||||| || ||| |||||
Sbjct 8625 GGTGGTCTTTTTCATTTTCTGGACACCTTACAACCTGGTTCTCCTTCTCTCTGTTTTTCA 8566
Query 177044 CGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGAT 177103
| ||| | ||| | | |||| || ||||| | ||||| |||| ||||| |
Sbjct 8565 AACGACCTTCCTTGAGACCGACTGTGAATGGAGCAAGCAGCTGGACCTGGCCATGCTGGT 8506
Query 177104 AACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGG 177163
||| | | |||||| | ||||| || ||||||| ||||||||||| || || ||
Sbjct 8505 GACAGAGGTGATCGCCTACTCGCACTGCTGTGTCAACCCCGTGATCTACGCCTTTGTCGG 8446
Query 177164 GGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 177223
|||||||| || |||||| |||||| ||| ||| | |||||||||||||| |
Sbjct 8445 TGAGAAGTTCCAAAAACACCTTCGCCACTTTTTCTACAGGCATGTGGCCATCTACCTGGG 8386
Query 177224 CAAGTACATCCCCTTCCT 177241
||| |||||||| |||||
Sbjct 8385 CAAATACATCCCATTCCT 8368
Score = 334 bits (370), Expect = 9e-87
Identities = 593/858 (69%), Gaps = 9/858 (1%)
Strand=Plus/Minus
Query 9501 TGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAA 9560
|||| || |||||||| | | ||| || | || ||| || ||||| || | || |
Sbjct 9219 TGGGCTGCTGGGCAATGTGGTGGTGCTGGTGATCCTCACAAAATACAAGAGGCTCCGGAT 9160
Query 9561 CCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTT 9620
| || ||||| | ||| | || ||||| || ||||||||||| ||||| || ||| |
Sbjct 9159 TGTGACCAACATCTACCTGCTTAATTTGGCGATTTCTGACTTGCTCTTTCTGTTCACTCT 9100
Query 9621 GCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTG 9680
||| || ||||| |||||| | || || | |||| ||| ||||| | ||||
Sbjct 9099 GCCGTTCTGGATTCACTATGT-GGCGTGGA--ATGAGTGGGTCTTTGGCCACCGCGTGTG 9043
Query 9681 TAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCT 9740
||| | ||| || | | ||| || |||||||| || |||| | |||||||||
Sbjct 9042 TAAGTTCCTCTCAGGGCTTTATTATCTGGGCTTGTACAGCGAGATCTTCTTCATCATCCT 8983
Query 9741 GCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAAC 9800
||| || ||||| |||| || || | ||| | || || || | | ||||
Sbjct 8982 GCTGACGATAGACCGGTACCTGGCCATCGTCCACGCCGTGTTCGCCCTTCGAACCCGAAC 8923
Query 9801 AGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCT 9860
|||| | |||||| | ||| | | | || ||| ||||||||| | ||||
Sbjct 8922 TATAACATTTGGCATGGCAACCAGCATCTTCACATGGGGCCTGGCAGGGCTAGCAGCCCT 8863
Query 9861 CCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTA 9920
||| |||||| |||| || | |||||| || ||| | | | ||| ||||
Sbjct 8862 CCCGGAATTTATCTTCCACGAGTCCCAAGAGGATTTTGGAAAGCCTGTGTGCAGTCCTCT 8803
Query 9921 CTACCCAGAGA-TGTCTACAAATGTTTGGAGGCGCGCCCACGT--TGCAAAGGTGATTAT 9977
|||||||| | || | ||| |||| || |||||| ||| || ||| |||
Sbjct 8802 TTACCCAGAAAATGAAGA-AAACACCTGGAAGCATTTCCACGTGCTGCGAA--TGAATAT 8746
Query 9978 GTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAG 10037
|| ||||| ||||||||||| |||||||||||||||||| | ||| |||| ||
Sbjct 8745 CTTGGGTCTCGCCCTGCCTCTGCTCGTTATGGCTGTCTGCTACTCAGGAATCATCAAAAC 8686
Query 10038 ACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCAT 10097
||| |||| | ||||| || |||||||||||||| ||| ||||||| |||||||||||
Sbjct 8685 GCTGCTGAGATGTCCCAGTAAAAAGAAGTACAAGGCTATCCGGCTCATTTTTGTCATCAT 8626
Query 10098 GGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 10157
||||| || ||| |||| |||||||| |||||| | |||||||| || ||| |||||
Sbjct 8625 GGTGGTCTTTTTCATTTTCTGGACACCTTACAACCTGGTTCTCCTTCTCTCTGTTTTTCA 8566
Query 10158 CGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGAT 10217
| ||| | ||| | | |||| || ||||| | ||||| |||| ||||| |
Sbjct 8565 AACGACCTTCCTTGAGACCGACTGTGAATGGAGCAAGCAGCTGGACCTGGCCATGCTGGT 8506
Query 10218 AACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGG 10277
||| | | |||||| | ||||| || ||||||| ||||||||||| || || ||
Sbjct 8505 GACAGAGGTGATCGCCTACTCGCACTGCTGTGTCAACCCCGTGATCTACGCCTTTGTCGG 8446
Query 10278 GGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 10337
|||||||| || |||||| |||||| ||| ||| | |||||||||||||| |
Sbjct 8445 TGAGAAGTTCCAAAAACACCTTCGCCACTTTTTCTACAGGCATGTGGCCATCTACCTGGG 8386
Query 10338 CAAGTACATCCCCTTCCT 10355
||| |||||||| |||||
Sbjct 8385 CAAATACATCCCATTCCT 8368
>seq8719
Length=77844
Score = 170 bits (188), Expect = 2e-37
Identities = 135/162 (83%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||||| |||| ||| || | ||||||||| ||||||| |||||||| ||||||||||||
Sbjct 22558 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 22499
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| ||||||||||| || | |||||||||||||||||| ||||| || | ||
Sbjct 22498 ACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 22439
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|||||||||||||| ||| ||||| || || |||||||||
Sbjct 22438 ACGTAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATG 22397
>seq3181
Length=153930
Score = 165 bits (182), Expect = 1e-35
Identities = 131/157 (83%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||| | |||||||| |||||| || || ||||||||||||||||||||||| | ||
Sbjct 30289 CAGCGTCGCAGCCTCAGCCTGAGAGTCTTCAGCTTTTCCCCCAGGGAGTTCACATGCTCG 30230
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| ||| | |||||||||||| ||| |||||||||| |||| |||||||||||||
Sbjct 30229 TTGAT---GTCTGGGCTGTGGTTCTCAGCCAGGGGCATCACTTCCTTCAGGTAAAACTGG 30173
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
|||||||| |||| ||| ||||| |||||||||||||
Sbjct 30172 ATCATCTCTGACAAGGCTTGGCAACCCAGGTAACCCT 30136
Score = 118 bits (130), Expect = 1e-21
Identities = 83/95 (87%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981
|||||||||||| | | ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 32482 TCAGTTTTTCATTCTCATTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACTC 32423
Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|||||||| |||||||| ||||| || |||||||
Sbjct 32422 ACTCATGGCTTTGTAGACACCTTTCTCTTGGAGCT 32388
Score = 96.9 bits (106), Expect = 4e-15
Identities = 114/152 (75%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356
|||||| | ||| ||| |||||||||| || | |||||| |||||||||||||||||||
Sbjct 28935 AAAGAAAGCCTTCACCTTGCTGAAGGCAGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 28876
Query 138357 GGTGGGCAATGTAGG-GCAGTCGTCCCCAGACTCACTGTCATATTTGTTGTCGGCCCACA 138415
|| || || || || |||| || | |||| |||| | || | ||| | ||
Sbjct 28875 GGCTGG-AAAGTGGGTGCAGCTGTTCTCAGATGGGGTGTCCTGGTTTAGGCTGGCTCCCA 28817
Query 138416 CCCCGGCCAGGAGAACCAGGCAACACAGCAGC 138447
|||| |||| ||| ||||||||||| ||||||
Sbjct 28816 CCCCAGCCAAGAGGACCAGGCAACATAGCAGC 28785
Score = 89.7 bits (98), Expect = 6e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074
||| ||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||
Sbjct 31325 CTTACTGAAGGCGGTCTTCACCTGCTCCACGGCCTTGCTCCTGTTCTCGCAGGGCAGAAA 31266
Query 138075 TC 138076
||
Sbjct 31265 TC 31264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589392517438880
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