Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq42976 161 3e-35 seq83063 102 2e-17 >seq42976 Length=315 Score = 161 bits (178), Expect = 3e-35 Identities = 224/310 (72%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 15424 AGTCCGTAGCGAAGGCCAAGATTCTTGTTGCGCTGGGAGAGGGGGAATTTGCCGGGCAGC 15483 ||||||| || || || || | || | || || || || ||||||||||||||| ||| Sbjct 1 AGTCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGC 60 Query 15484 TAACGGCTAAAGATATTTATCTTGATGGCACACCACTTGAGAACGCTGATGGGTCGCAGA 15543 | || | ||| |||| | ||| || || ||||| || ||| ||||| || || | | Sbjct 61 TGACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAA 120 Query 15544 ACTTTAGCGGCGTGGCGTGGGAGTTCCGTCCGGGGACTCAGGCTCAAAACTACATCCAGG 15603 ||||| || |||| |||||| | |||||| || |||||||| |||| |||||| |||| Sbjct 121 ACTTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGG 180 Query 15604 GAATCCCCGGTACCGAGAATGAAATCAGCGTCGGTACCGAAGTTTCAAGCGCTAC-CGCC 15662 | || || | | ||||||||||| | ||| |||||| | | | || || | |||| Sbjct 181 GGATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACC--ACTGTGCAGAGCAGCACGCC 238 Query 15663 -TGGACGCACACCTTTACCAATACCCAACTGTCAGCTGTTCGTCTGCGGCTCAAATGGCC 15721 ||| |||| | || |||||| | || ||||| ||| | || | || || |||||||| Sbjct 239 GTGGGCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCC 298 Query 15722 ATCGCTGTTT 15731 || |||||| Sbjct 299 GTCCCTGTTT 308 >seq83063 Length=222 Score = 102 bits (112), Expect = 2e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 14026 GAATATCCGCGCGAGTGCTGCGGCGTGGTAGCGCAGAAAAGCCGGGTTGAGCGCTATTTC 14085 |||||||| || ||||||||||| ||| | ||||| ||| ||| || | | |||||| Sbjct 47 GAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTGGTGAAATATTTC 106 Query 14086 CCCTGCCGCAACCTCTCAGCCGAGCCGACAGAGCATTTTCACCTTTCTCCTGAAGACTAC 14145 ||||| ||||| || | | ||| || |||||| | | || || ||||| ||| Sbjct 107 CCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTATCGCCGGAAGATTAC 166 Query 14146 GCAGCTGCCGAGGACTGGGGGACGGTGGTGGCCATTGTTCACAGCCACCCTGACGC 14201 || ||||| || || ||||| |||||| | | ||||||||||| || || || || Sbjct 167 GCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTCATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148115046505768