Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 163 3e-35
seq7134 147 2e-30
seq4400 145 8e-30
seq66 89.7 5e-13
>seq20608
Length=25523
Score = 163 bits (180), Expect = 3e-35
Identities = 415/619 (67%), Gaps = 13/619 (2%)
Strand=Plus/Minus
Query 116601 GCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCG 116660
|||| || || || || | || |||||| || || |||| ||||| || || |
Sbjct 9787 GCCGTTTTGTCATCTTTCTTATCGAATACCATGATATTTGGCAGATGTATAAGAAAATGG 9728
Query 116661 AGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG-AGCGACTGGGA- 116718
|||| || || ||| | | |||||||||| | | || ||||||| ||| |||||||
Sbjct 9727 AGGCTTCCTTTTGGGCAGCTGAGGAGGTGGTC-TCTCTAAGGACATTCAGC-ACTGGGAA 9670
Query 116719 GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAG 116778
|| || || | | ||| | |||| || || || ||||| || || || | ||
Sbjct 9669 GCCCTAGAGCTTGAG-GAGAGATATTTTATATCTCATGTTCTGGCTTTCTTTGCAACAAG 9611
Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838
|| ||||| || || || || |||| ||| |||| || || || ||| | | ||
Sbjct 9610 TGATGGCATAGTAAATGAAAACTTGGTGGAGTGTTTTAGCCAAGAAGTTCAGATTACAGA 9551
Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898
|| | || ||||| ||||| || || |||||||| ||| | | || ||||||| ||
Sbjct 9550 AGCCCTCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACGTTCTGAAATGT-TTA 9492
Query 116899 GAC-CCTCATCGACACGTACGTGC-GCTCTTCGGAGGA--GAAGCTCCGTTTGTTGAACG 116954
| | |||||| ||||| ||| | | || | || | ||| | | | || || |
Sbjct 9491 GTCTCCTCATTGACACTTACATTAAGGACTCCAAAGAAAGGAAATTTC---TCTTCAATG 9435
Query 116955 CCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCG 117014
|||| |||| |||||| | || || ||||||| || ||||| ||| ||||| | |
Sbjct 9434 CCATTGAGATGATGCCTCGTGTAAAGAAGAAGGCAGATTGGGCTTTGCCTTGGATTGGAG 9375
Query 117015 GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCT 117074
|| |||||| ||| || || || |||| ||||| || | || || || ||||||
Sbjct 9374 ACAAAGAGGCTACCTGTGGAGAACGTGTGGTAGCCTTTGCTACGGTGGAAGGAATCTTCT 9315
Query 117075 TTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGA 117134
|||| || ||| || | ||||| ||||||||||| | || ||| |||| || || |
Sbjct 9314 TTTCTGGTTCTTTTGCATCAATATTCTGGCTCAAGAATCAAGGACTCGTGCCTGGTCTCA 9255
Query 117135 CTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGC 117194
| || ||| || || || ||| || | ||| | || || ||||||||||| |
Sbjct 9254 CATTTTCCAATGAACTTATTAGCAGAGATAAAGGTTTACACTGTGACTTTGCCTGCCCGA 9195
Query 117195 TGTTCAAGCATTTGGTGCA 117213
|||| || || || ||||
Sbjct 9194 TGTTTAAACACCTGCTGCA 9176
>seq7134
Length=91468
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || |||||||||||| | || || || ||||||||| | || || || |||
Sbjct 86302 AATGCAGATCTTCGTAAAAACGTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 86361
Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | |||| |||||| || || | || ||||||||||||||| | ||||
Sbjct 86362 TGACACCATCGAGAACG-TCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACC 86420
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| | | |||| || || ||||||||||| |||| ||||| || |||||||
Sbjct 86421 AGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACA 86480
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||| ||| |||| ||||| || || |||| | || ||||||
Sbjct 86481 ACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGCGGC 86530
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||||| | || || || |||
Sbjct 86531 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86590
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | ||||||
Sbjct 86591 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86650
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || |||||||| |||| ||||| || |||||||||
Sbjct 86651 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86710
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || || |||| | || ||||||
Sbjct 86711 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGCGGC 86758
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||||| | || || || |||
Sbjct 86759 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86818
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | ||||||
Sbjct 86819 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86878
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || |||||||| |||| ||||| || |||||||||
Sbjct 86879 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86938
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| ||||| || || |||| | || ||||||
Sbjct 86939 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGCGGC 86986
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||||| | || || || |||
Sbjct 86987 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87046
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| |||||||||||| | ||||||
Sbjct 87047 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 87106
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || ||||||||||| |||| ||||| || |||||||||
Sbjct 87107 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 87166
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||| ||| |||| ||||| || || |||| | || ||||||
Sbjct 87167 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGTCTCAGAGGCGGC 87214
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || ||||||||| | || || || |||
Sbjct 87215 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87274
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | || || |||||||||||| | ||||||
Sbjct 87275 GACACCATCGAGAATGTCAAGGCCAAGATCCATGATAAGGAGGGCATCCCCCCAGACCAG 87334
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || || || |||||||| || | ||||| || |||||||||
Sbjct 87335 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAAC 87394
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||| ||| |||| |||| | || | ||||||||||| ||
Sbjct 87395 ATCCAGAAAGAGTCCACCTTGCACTTGGTCCTCCGCTTGAGGGGAGG 87441
>seq4400
Length=129001
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||| |
Sbjct 40353 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40412
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| || || | || ||||| |||||||| | |||||
Sbjct 40413 GATACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCAGACCA 40471
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || ||||| |||||||| || | ||||| ||| ||| |||||
Sbjct 40472 GCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAA 40531
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||| ||| | || ||||| || ||| |||| ||||||| |||
Sbjct 40532 CATCCAGAAAGAGTCGACCCTGCACCTGGTGCTGCGTCTGAGGGGTGGC 40580
Score = 143 bits (158), Expect = 3e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||
Sbjct 39894 AAAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 39953
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| ||| | | | | |||| | |||| || || | || ||||| |||||||| | ||
Sbjct 39954 AGCGATACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGA 40012
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | ||||||| || ||||| |||||||| || | ||||| ||| ||| ||
Sbjct 40013 CCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTA 40072
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| ||| | || ||||| || ||| | || ||||||| ||
Sbjct 40073 CAACATCCAGAAAGAGTCGACCCTGCACCTCGTGCTCCGTCTGAGGGGTGG 40123
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||| |
Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| || || | || ||||| |||||||| | |||||
Sbjct 40185 GATACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCA 40243
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || ||||| |||||||| || | ||||| ||| ||| |||||
Sbjct 40244 GCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAA 40303
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||| ||| | || ||||| || ||| | || ||||||| ||
Sbjct 40304 CATCCAGAAAGAGTCGACCCTGCACCTCGTGCTCCGTCTGAGGGGTGG 40351
>seq66
Length=542294
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| | || || || |||
Sbjct 261821 ATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 261762
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | || || |||||||||||| | ||||||
Sbjct 261761 GACACCATCGACAATGTCAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCAGACCAG 261702
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || ||| |||| || | | ||| || |||||||||
Sbjct 261701 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAAGATGGACACACTCTGTTTGACTACAAC 261642
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||| | || |||| | || | || | ||||||||||| ||
Sbjct 261641 ATCCAGGAAAAGTCCACCTTTCACTTGGTCCTCCGCTTGAGGGGAGG 261595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514621726054720
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