Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_002167.1
Length=39732
Score E
Sequences producing significant alignments: (Bits) Value
seq42976 136 1e-27
seq83063 125 2e-24
>seq42976
Length=315
Score = 136 bits (150), Expect = 1e-27
Identities = 213/305 (70%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 15225 TCTGTAGCGAAGGCCAAAATCCTCGTTGCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTC 15284
|| || || || || ||| | || | || || |||||||| || ||||| ||| ||||
Sbjct 3 TCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTG 62
Query 15285 ACCGGCAAAGATATCTACCTGGACGGAACAGCGCTGGAGAATGCTGACGGCTCCCAAAAC 15344
||||| ||| |||||| |||||||| ||| |||| |||||||||||| || |||||
Sbjct 63 ACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAAAC 122
Query 15345 TTCAGCGGGGTAACGTGGGAGTTTCGCGCGGGAACTCAGGCGCAAAAATATATTCAGGGT 15404
|| ||||| |||||| | || | |||||||||||||||| || ||||||||
Sbjct 123 TTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGGGG 182
Query 15405 ATTCCCGGTACCGAAAACGAGATCAGCGTAGGAACTGAGGTATCAAGTGCCACAACCTGG 15464
|| || | | || || || || | ||| || || || || ||| | |||
Sbjct 183 ATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGTGG 242
Query 15465 ACGCGCACGTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCG 15524
||| | || |||||| ||||||| || || | ||| | || || |||||||| ||
Sbjct 243 GCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGTCC 302
Query 15525 CTTTT 15529
|| ||
Sbjct 303 CTGTT 307
>seq83063
Length=222
Score = 125 bits (138), Expect = 2e-24
Identities = 143/190 (75%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 12835 CATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGGCGTGGTGGCGCAGAAAAGCCGCGT- 12893
||||| | | ||||||||| | |||||| ||||| ||| | ||||| ||| ||| ||
Sbjct 35 CATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTG 94
Query 12894 -TGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTT 12952
|||| |||||||| || || ||| | || | | |||||||| |||||||| | |
Sbjct 95 GTGAAA--TATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTAT 152
Query 12953 GCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTC 13012
|| ||||| ||||| ||||| || || |||||||||||||||| || ||||||||||
Sbjct 153 CGCCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTC 212
Query 13013 ACCCTGACGC 13022
| || || ||
Sbjct 213 ATCCGGATGC 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126880865312816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |