Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq42976 136 1e-27 seq83063 125 2e-24 >seq42976 Length=315 Score = 136 bits (150), Expect = 1e-27 Identities = 213/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 15225 TCTGTAGCGAAGGCCAAAATCCTCGTTGCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTC 15284 || || || || || ||| | || | || || |||||||| || ||||| ||| |||| Sbjct 3 TCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGCTG 62 Query 15285 ACCGGCAAAGATATCTACCTGGACGGAACAGCGCTGGAGAATGCTGACGGCTCCCAAAAC 15344 ||||| ||| |||||| |||||||| ||| |||| |||||||||||| || ||||| Sbjct 63 ACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAAAC 122 Query 15345 TTCAGCGGGGTAACGTGGGAGTTTCGCGCGGGAACTCAGGCGCAAAAATATATTCAGGGT 15404 || ||||| |||||| | || | |||||||||||||||| || |||||||| Sbjct 123 TTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGGGG 182 Query 15405 ATTCCCGGTACCGAAAACGAGATCAGCGTAGGAACTGAGGTATCAAGTGCCACAACCTGG 15464 || || | | || || || || | ||| || || || || ||| | ||| Sbjct 183 ATGCCGGCGGCGGAGAATGAAATTACCGTTGGTACCACTGTGCAGAGCAGCACGCCGTGG 242 Query 15465 ACGCGCACGTTTACCAATACGCAGCTTTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCG 15524 ||| | || |||||| ||||||| || || | ||| | || || |||||||| || Sbjct 243 GCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCCGTCC 302 Query 15525 CTTTT 15529 || || Sbjct 303 CTGTT 307 >seq83063 Length=222 Score = 125 bits (138), Expect = 2e-24 Identities = 143/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 12835 CATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGGCGTGGTGGCGCAGAAAAGCCGCGT- 12893 ||||| | | ||||||||| | |||||| ||||| ||| | ||||| ||| ||| || Sbjct 35 CATGCAGAACGTGAATATCCCCGTGAGTGCTGCGGGGTGATCGCGCAAAAATCCCGTGTG 94 Query 12894 -TGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTT 12952 |||| |||||||| || || ||| | || | | |||||||| |||||||| | | Sbjct 95 GTGAAA--TATTTCCCCTGTCGCAATATCGCGGTTTCTCCGGAGGAACATTTTGTCTTAT 152 Query 12953 GCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTC 13012 || ||||| ||||| ||||| || || |||||||||||||||| || |||||||||| Sbjct 153 CGCCGGAAGATTACGCCGCTGCGGATGATTGGGGAACGGTGATCGGTATTGTTCACAGTC 212 Query 13013 ACCCTGACGC 13022 | || || || Sbjct 213 ATCCGGATGC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126880865312816