Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq12324 91.5 3e-13 >seq12324 Length=54889 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 52189 CAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTTTCCA 52248 ||||||||| | | || ||||| || || |||| | || | |||||||| || ||| Sbjct 35084 CAGTTCCATGTGACCATTGGACACACAGCACTGTCTCTCTATACTGATTGCCCCTTCCCA 35025 Query 52249 AAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGGTAAC 52308 |||||||| || ||| | | ||| |||| | || || |||||||| || ||| |||| Sbjct 35024 AAATGGATGCACTGGGCTCTAATTGCCTATGCAATAAGCTTCATATTCCTCTTTCTTAAC 34965 Query 52309 TTCTATTTTAGAACATACAA 52328 |||||| || | |||||||| Sbjct 34964 TTCTATGTTCGGACATACAA 34945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922126214830880