Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_002486.1
Length=45636
Score E
Sequences producing significant alignments: (Bits) Value
seq37096 107 6e-19
seq40015 95.1 4e-15
seq57556 91.5 4e-14
>seq37096
Length=1890
Score = 107 bits (118), Expect = 6e-19
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 23946 AGATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGA 24005
||| |||||||||| ||| |||||||| |||||||||| |||||||| ||||| |||||
Sbjct 893 AGAAAGAAATAGCTATTCGAAAACTGACAATGATGCAACCTTTATGAGGATGAAAGAAGA 952
Query 24006 CCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACA 24047
||||||| ||||| ||| | ||||||||||| || ||||
Sbjct 953 CCATATGCTTAATGGACAATTAAAGCCAGGATATAACATACA 994
>seq40015
Length=1056
Score = 95.1 bits (104), Expect = 4e-15
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 23947 GATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGAC 24006
||||||||||| ||||||||||| ||| ||| |||||||||||| | ||||| || ||
Sbjct 157 GATAGAAATAGTTTTTCTAAAACAGATATTGAAGCAACTTTTATGCGTATGAAAGATGAT 216
Query 24007 CATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGC 24053
|| ||| |||| || ||| | ||||| | |||||| | ||||| ||
Sbjct 217 CACATGCAAAACGGACAATTAAAGCCTGCTTACAATGTTCAAATTGC 263
>seq57556
Length=433
Score = 91.5 bits (100), Expect = 4e-14
Identities = 140/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 5391 TATTCGCTGACTCGGTAGCTGGTAGTGATAATTCAATACTTGTTGGGGAACTAGCGAAAA 5450
|||| |||| | ||| | || | ||| ||||||| ||| | | ||| |||| | |
Sbjct 339 TATTTACTGATGCAGTAACAGGAACTGAAGATTCAATTCTTATAAGAGAATTAGCAACTA 280
Query 5451 TACTTAAACAAAACGGTGTTGATATAGGACAAAACAGGTTGTTCAAATGGTTAAGAAATA 5510
|| | || ||||| || |||||||||||| |||| || | ||||||||| | || | |
Sbjct 279 TATTAAATCAAAAAGGAGTTGATATAGGAGAAAAGAGACTATTCAAATGGATGAGGGAAA 220
Query 5511 ATGGATATCTCATTAAAA-AGAGTGGAGAAAGTTATAACTTACCAACTCAAAAGAGTATG 5569
|||| ||| | || |||| ||| ||| | | | |||||||| |||||||| |||
Sbjct 219 ATGGGTATTTAATCAAAAGAGA-TGGTATAGATAAGAACTTACCTACTCAAAAATCCATG 161
Query 5570 GATCTAAAAATCTTGGA 5586
||||| ||| | ||||
Sbjct 160 GATCTTAAATTAATGGA 144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145752851729072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |