Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq8719 95.1 1e-14
seq7258 86.0 5e-12
>seq8719
Length=77844
Score = 95.1 bits (104), Expect = 1e-14
Identities = 123/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447
|||| | ||| | ||||| | |||||||| ||| || ||||| || ||||| | ||
Sbjct 22385 AGATCTTCCTCTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGGTGAA 22444
Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
| ||| |||| || || |||| || | || | || ||||| |||||||| || ||
Sbjct 22445 TGGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGTGTGCCCTT 22504
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||| || || || ||||| ||||| || || ||||||||||| | ||||
Sbjct 22505 CAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAG 22554
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 20284 ACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACG 20343
||| |||||| || ||||||||||| ||| | ||||| || ||| || ||| |||| |
Sbjct 21515 ACAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAAGTGATTGATACAATCAAAATG 21574
Query 20344 AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389
||||| | ||||||||||| || | || ||||||||| | ||||
Sbjct 21575 AACCCTGATGACAGAAGAATCATCCTGTGTGCCTGGAACCCAAAAG 21620
>seq7258
Length=92960
Score = 86.0 bits (94), Expect = 5e-12
Identities = 188/279 (67%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 20468 TGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGC 20527
||||||||||| ||||| || || ||||| || || |||||||| ||||| |
Sbjct 92958 TGTATCAACGAAGTGCTGACATCTTCCTAGGTGTACCCTTTAATATTGCTTCATATGC-C 92900
Query 20528 TGCTTACGTAT-ATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACC 20586
| ||| || ||||| || || |||||||| || || | ||||| || | || ||
Sbjct 92899 TTATTATTAATGATGATGGCCCAAGTTACAGAATTGGAACCAGGTGATTTCATACATACA 92840
Query 20587 ATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGA 20646
|||| || || |||||||| || ||| |||| | | || ||||||||| | ||
Sbjct 92839 CTAGGTGATGCCCATATTTATAAAAACCATTTAGACCAAGTTAACTTACAGTTATCTAGA 92780
Query 20647 CAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTT 20706
|||| || | | || | | || | | || || | | ||| | ||| | ||||||
Sbjct 92779 GAACCTAAGGAGCTTCCTCTTATGAGCTTGAATCCAAATATAAAAAACATTGAAGATTTT 92720
Query 20707 AAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCAT 20745
| ||| |||||| | ||| ||||||||||| |||
Sbjct 92719 ACTTTTGAAGATTTTATATTAAGCGGTTATAATCCTCAT 92681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398732659117540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |