Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8719 95.1 1e-14 seq7258 86.0 5e-12 >seq8719 Length=77844 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | ||| | ||||| | |||||||| ||| || ||||| || ||||| | || Sbjct 22385 AGATCTTCCTCTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGGTGAA 22444 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||| |||| || || |||| || | || | || ||||| |||||||| || || Sbjct 22445 TGGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGTGTGCCCTT 22504 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| || || || ||||| ||||| || || ||||||||||| | |||| Sbjct 22505 CAACATCGCCAGCTATGCCCTGCTCACCTACATGATTGCACACATCACAG 22554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 20284 ACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACG 20343 ||| |||||| || ||||||||||| ||| | ||||| || ||| || ||| |||| | Sbjct 21515 ACAGATTATTCAGGTCAAGGAGTAGACCAACTGCAAAAAGTGATTGATACAATCAAAATG 21574 Query 20344 AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 ||||| | ||||||||||| || | || ||||||||| | |||| Sbjct 21575 AACCCTGATGACAGAAGAATCATCCTGTGTGCCTGGAACCCAAAAG 21620 >seq7258 Length=92960 Score = 86.0 bits (94), Expect = 5e-12 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 20468 TGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGC 20527 ||||||||||| ||||| || || ||||| || || |||||||| ||||| | Sbjct 92958 TGTATCAACGAAGTGCTGACATCTTCCTAGGTGTACCCTTTAATATTGCTTCATATGC-C 92900 Query 20528 TGCTTACGTAT-ATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACC 20586 | ||| || ||||| || || |||||||| || || | ||||| || | || || Sbjct 92899 TTATTATTAATGATGATGGCCCAAGTTACAGAATTGGAACCAGGTGATTTCATACATACA 92840 Query 20587 ATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGA 20646 |||| || || |||||||| || ||| |||| | | || ||||||||| | || Sbjct 92839 CTAGGTGATGCCCATATTTATAAAAACCATTTAGACCAAGTTAACTTACAGTTATCTAGA 92780 Query 20647 CAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTT 20706 |||| || | | || | | || | | || || | | ||| | ||| | |||||| Sbjct 92779 GAACCTAAGGAGCTTCCTCTTATGAGCTTGAATCCAAATATAAAAAACATTGAAGATTTT 92720 Query 20707 AAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCAT 20745 | ||| |||||| | ||| ||||||||||| ||| Sbjct 92719 ACTTTTGAAGATTTTATATTAAGCGGTTATAATCCTCAT 92681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398732659117540