Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 98.7 2e-15
seq1625 89.7 1e-12
>seq20608
Length=25523
Score = 98.7 bits (108), Expect = 2e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||| | || ||||||||||||||| |||| | || ||||| || ||||||
Sbjct 9345 GTAGCCTTTGCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 9286
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| || | ||||||||||||| | |||||||| | ||| || ||
Sbjct 9285 CTCAAGAATCAAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTTATTAGCAGAGAT 9226
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076
||||| | || | |||||||| ||| | |||| |||
Sbjct 9225 AAAGGTTTACACTGTGACTTTGCCTGCCCGATGTTTAAA 9187
>seq1625
Length=211188
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| |||||||| || || ||||||||||||||| |||| | || ||||| || ||||||
Sbjct 134561 GTAGCCTTTGCCGCGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGG 134502
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
||||||| | || | ||||||||||||| | ||||||||
Sbjct 134501 CTCAAGAAACGAGGACTCATGCCTGGTCTCACATTTTCCAATGA 134458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988407739637260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |