Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 295 9e-75
seq12486 170 3e-37
seq2665 131 2e-25
seq1625 114 2e-20
seq7358 107 3e-18
>seq20608
Length=25523
Score = 295 bits (326), Expect = 9e-75
Identities = 426/599 (71%), Gaps = 4/599 (1%)
Strand=Plus/Plus
Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202
|||||||||||| || || || || ||||||| ||| | ||||| ||||| | |||
Sbjct 9185 TGTTTAAACATCGGGCAGGCAAAGTCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCA 9244
Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262
|||||||| ||||| || |||| || || | || || ||||| ||||| || |||||
Sbjct 9245 TTGGAAAATGTGAGACCAGGCACGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAA 9304
Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 36319
|| ||||||||||| |||||||| || | |||||||| | | | |||||| | |
Sbjct 9305 GAACCAGAAAAGAAGATTCCTTCCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTA 9364
Query 36320 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379
| | |||| ||||| ||||||||| |||||||| ||||||| ||||||
Sbjct 9365 GCCTCTTTGTCTCCAATCCAAGGCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATC 9424
Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439
|||| || ||||| |||||| | || |||| || || |||| || || |||||
Sbjct 9425 ATCTCAATGGCATTGAAGAGAAATTTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATG 9484
Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499
| |||||| ||||||| ||| | |||||||| ||||| ||||| || || ||||||||
Sbjct 9485 AGGAGACTAAACATTTCAGAACGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAG 9544
Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559
|| || |||||||| |||||| | ||| | || | || |||||||| |||||
Sbjct 9545 AGGGCTTCTGTAATCTGAACTTCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATG 9604
Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619
|| ||||| | |||||| || |||| ||||| |||||||||| | || | | |
Sbjct 9605 CCATCACTTGTTGCAAAGAAAGCCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCT 9664
Query 36620 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679
|| | ||| | | || || ||||| | | |||| || || ||| |||||| ||
Sbjct 9665 AGGGCTTCCCAGTGCTGAATGTCCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAA 9723
Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
||||| || |||||||| | ||| || ||||| |||| || |||| || |||||
Sbjct 9724 GCCTCCATTTTCTTATACATCTGCCAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq12486
Length=54161
Score = 170 bits (188), Expect = 3e-37
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290
|| |||||| | ||||||||| ||| ||||| |||| ||| |||||||||||||||||
Sbjct 46166 TTTTTATTAACTGCTTCCAAAAACTGCAACAGGTGCAGGAATAGATTGATGATATCCAAA 46107
Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350
|||| |||| | ||||| ||||| || ||||| || ||| |||| || || |||||
Sbjct 46106 TAGAGGCTGATGGCAGCTAATACATACTCCTCAGGTGACAGCCTATGCATCAGGGAGTGT 46047
Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410
||||||||||| |||||||| ||||| | |||||| || ||||| || ||||| ||||
Sbjct 46046 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTGCAGCAGCCAAGACCAACTCC 45987
Query 9411 ACTGTTTCACTTTGCACAAATA 9432
| ||| ||| | || | |||||
Sbjct 45986 ATTGTCTCATTATGAAAAAATA 45965
Score = 129 bits (142), Expect = 8e-25
Identities = 100/119 (84%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|||||||||| ||| ||||| || |||| |||||||||||||| |||||| | |||||
Sbjct 40106 CCTGCTCCAAATTTGCTGAAGTCCTTCTTAGATTGTAGAGTATACACAGTCAAACCAAGA 40047
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| || ||||||||||| || |||||||||| || |||| |||||||||||||||||
Sbjct 40046 AATACAGCAGTAGTCAGTATAAAAGCTTGCAGAATAACATAGACATCATAGAAAGTAAC 39988
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691
||||||| |||||||||| | || || ||||| |||||||||| |||||||||||| ||
Sbjct 34087 AAATCCAAAAAGCAGGTACAGGTTAAGCGGATGCTTATGTCTGTTTAAAGTCAATGCTAA 34028
Query 9692 AATCAAGCCTATAGAT 9707
|||||| || | ||||
Sbjct 34027 AATCAAACCCAAAGAT 34012
>seq2665
Length=168205
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 80467 ACCTGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATG 80526
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 80527 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 80586
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 80587 CTGTTTCTTATACCATA 80603
Score = 109 bits (120), Expect = 7e-19
Identities = 139/189 (74%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| || || || ||||||||||| |||||| ||| | || || || |||||||| |
Sbjct 77642 TCCAGCCATAGAAGTGCATACTCGTAAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 77701
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| ||| || |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 77702 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTTTCGGCTGCCATCTTGAGAACAGTTT 77761
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 65084
| || | |||||||| | ||| ||||||| | |||| | || || |||| | |||||
Sbjct 77762 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTTGTA 77821
Query 65085 T--TCTGAA 65091
| ||||||
Sbjct 77822 TGCTCTGAA 77830
Score = 96.9 bits (106), Expect = 5e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| |||||||||||| |||||||| |||||||||||||| | || | || || | |
Sbjct 89086 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTAGCACG 89145
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 89146 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 89205
Query 66176 CGGTTCCAAGTATATGGC 66193
|| |||| ||| || ||
Sbjct 89206 AGGCTCCAGGTAAATAGC 89223
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| || | ||| |||||||||||||| | || || || || || || || || | |
Sbjct 99856 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 99915
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
||||||| || || || | |||||| | || || ||| |||| || |||| ||| || |
Sbjct 99916 TGGCATAGTCAGGGTGCTTTGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTA 99975
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964
||| || || || || ||| | |||| || || || || |||||
Sbjct 99976 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGAATTACTTTCAT 100021
Score = 86.0 bits (94), Expect = 8e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || ||||| | | | || || |||||||| || || || || || || |
Sbjct 84561 CATAGGTTTCATATGGGTCATGTTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 84620
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||||||||| ||||| | |||||| | || || || | || ||||| ||||
Sbjct 84621 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTTTCAAAAGGAT 84680
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | | |||||||| || ||||| | ||||| || ||||| || || || | || |
Sbjct 84681 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGGTGGC 84740
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 84741 GTTTATTTGA 84750
>seq1625
Length=211188
Score = 114 bits (126), Expect = 2e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 134438 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCT 134497
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| ||||| || ||||| || ||||||||||| |||||||| || || |||||||
Sbjct 134498 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGG 134557
Query 36300 C 36300
|
Sbjct 134558 C 134558
Score = 95.1 bits (104), Expect = 2e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 36419 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 36478
|| |||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 136424 TCCTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 136483
Query 36479 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523
||||| || || |||||||| | || || |||||||| ||||||
Sbjct 136484 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTCT 136528
>seq7358
Length=89575
Score = 107 bits (118), Expect = 3e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | ||| |||||||| |||||||| ||||| || || | || ||
Sbjct 30052 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 30111
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 36301
||||| ||||| | ||||| ||||| || ||||||||||||||||| || ||||| ||
Sbjct 30112 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 30171
Query 36302 ATAAGTCTCTCTCC 36315
| | ||| |||||
Sbjct 30172 ACCACTCTTTCTCC 30185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657409549912480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |