Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 102 6e-17
>seq20608
Length=25523
Score = 102 bits (112), Expect = 6e-17
Identities = 311/469 (66%), Gaps = 24/469 (5%)
Strand=Plus/Minus
Query 22447 TTCATGTCTCACATACTGGCATTCTTTGCAATGGCAGATGGCATTGTAGGCGACAACCTT 22506
|| || ||||| | ||||| |||||||||| |||||||| ||| || ||| |
Sbjct 9645 TTTATATCTCATGTTCTGGCTTTCTTTGCAACAAGTGATGGCATAGTAAATGAAAACTTG 9586
Query 22507 GTGT-GCAATTTCGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTT 22565
||| | ||| || || ||| || | ||| |||||||| ||||||||| ||
Sbjct 9585 GTGGAGTGTTTTAGCCAA-GAAGTTCAG---ATTACAGAAGCCCTCTGTTTCTATGGCTT 9530
Query 22566 TCAGGTGGCAATGGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCAC----AT 22621
|| | || |||||||| |||| | ||||||||| || || || ||| ||| ||
Sbjct 9529 CCAAATTGCCATGGAAAACATACGTTCTGAAATGTTTAGTCTCCTCATTGACACTTACAT 9470
Query 22622 TAGTAGCTAAAGAGAATCAAGCCGCATTGTTTTCA--GCAGCTGAAGAT-ATGCCATGTG 22678
|| || | |||| || || | |||| || ||| ||| ||||| |||
Sbjct 9469 TAAGGACTCCAAAGAA---AGGAAATTTCTCTTCAATGCCATTGA-GATGATGCCTCGTG 9414
Query 22679 TTAAAGCCAAGGCACAGTGGGCTGCACAATGGCTGAATGCCACACATA-AGTCTATC--- 22734
| || |||||| | |||||| | ||| | || | ||| | || ||| |
Sbjct 9413 TAAAGAAGAAGGCAGATTGGGCTTTGCCTTGGAT---TGG-AGACAAAGAGGCTACCTGT 9358
Query 22735 GCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCG 22794
| | |||| | | |||||||| | || ||||| || | |||||||| || |||||
Sbjct 9357 GGAGAACGTGTGGTAGCCTTTGCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 9298
Query 22795 GCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTG 22854
| ||||||||||| ||||| | ||| |||| || | | |||||||| || |
Sbjct 9297 TCAATATTCTGGCTCAAGAATCAAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTT 9238
Query 22855 ATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTA 22903
|||||| | || ||||| |||||||||||||||| || | ||||||
Sbjct 9237 ATTAGCAGAGATAAAGGTTTACACTGTGACTTTGCCTGCCCGATGTTTA 9189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355830821363116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |