Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 291 1e-73
seq2665 129 8e-25
seq1625 123 3e-23
seq7358 111 2e-19
>seq20608
Length=25523
Score = 291 bits (322), Expect = 1e-73
Identities = 626/933 (67%), Gaps = 7/933 (1%)
Strand=Plus/Plus
Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT 41775
||| |||||| |||| || | |||| ||| ||| | | |||| ||||| || |
Sbjct 8851 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTTGACACCACTCCTATCCT 8910
Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835
|| | || || | || || || || |||||||| |||||| || ||| | ||
Sbjct 8911 CCTATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCACTTCCAGGGAGATAGTCTC 8970
Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895
||| || ||||| ||||| || || ||| || |||| ||| || || |
Sbjct 8971 CATAAAGTCAAAAGGATTTTCTACTCTAAAAACCTTGCTAAAATCCAGCTCCAGCATAAG 9030
Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955
||| ||||| | |||||| ||||| ||||| | |||||||| || | || ||
Sbjct 9031 TCTGTCTGCCACGAATTCAATATACTACTTCATTAAAGTACAATTCACCCCAGTGAGCTT 9090
Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015
||||| | ||| | || || || || ||||| || || | | | || ||
Sbjct 9091 TACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTAACAGAATTGATGATGATTTC 9150
Query 42016 TCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATC 42075
| | ||| | || ||| | || | |||||||||||| || || || ||
Sbjct 9151 TTTCACTCTCGGCTCCAAAGGTTTGTGCAGCAGGTGTTTAAACATCGGGCAGGCAAAGTC 9210
Query 42076 GCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAG 42135
||||| | ||| | |||||| ||||| | ||| |||||||| ||||| || |||| ||
Sbjct 9211 ACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCACGAG 9270
Query 42136 GCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTAC 42195
|| | || || ||||| ||||| || ||||| || |||||||||||||||||||| ||
Sbjct 9271 TCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCAC 9330
Query 42196 TGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTTG 42252
| |||||||| | | | |||||| | | | | |||| |||||
Sbjct 9331 CGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCAATCCAAGGCAA 9390
Query 42253 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 42312
||||||||| |||||||| ||||||| ||||||| | || |||||||| |||||| | ||
Sbjct 9391 AGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTGAAGAGAAATTT 9450
Query 42313 tttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAAT 42372
|||| || || |||| || || || || | |||||| ||||||| ||| | ||
Sbjct 9451 CCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACATTTCAGAACGTAT 9510
Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432
|||||| ||||| || || || || |||||||| ||| || |||| ||| ||||||
Sbjct 9511 GTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATCTGAACTTCTTG 9570
Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492
| ||| | || | || ||||| || ||||| || ||||| | |||||| || ||||
Sbjct 9571 GCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCAAAGAAAGCCAG 9630
Query 42493 TACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTT 42552
||||| |||||||||| | || || | || | ||| | | || || ||
Sbjct 9631 AACATGAGATATAAAATATCTCTCCTCAAGCTCTAGGGCTTCCCAGTGCTGAATGTCCTT 9690
Query 42553 AGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCA 42612
||| | | | || || || | | |||||| || || || || |||||||| | |||
Sbjct 9691 AGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTTCTTATACATCTGCCA 9749
Query 42613 GATATCATGATATTGAATTGGGAAAATAACAAA 42645
|||||||| |||| || | || || |||||
Sbjct 9750 AATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq2665
Length=168205
Score = 129 bits (142), Expect = 8e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
|| ||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 80467 ACCTGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATG 80526
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | || |
Sbjct 80527 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 80586
Query 71263 CTATTTCTAAGACCAT 71278
|| ||||| | |||||
Sbjct 80587 CTGTTTCTTATACCAT 80602
Score = 109 bits (120), Expect = 7e-19
Identities = 139/189 (74%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| || || || ||||||||||| |||||| |||| |||| || || || || || |
Sbjct 77642 TCCAGCCATAGAAGTGCATACTCGTAAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 77701
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 77702 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTTTCGGCTGCCATCTTGAGAACAGTTT 77761
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 71046
| || | |||||||| | ||| ||||||| | |||| | || || |||| | |||||
Sbjct 77762 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTTGTA 77821
Query 71047 T--TCTGAA 71053
| ||||||
Sbjct 77822 TGCTCTGAA 77830
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440
|||| || || ||||| | | || | ||| |||||||| || || || || |||||||
Sbjct 84561 CATAGGTTTCATATGGGTCATGTTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 84620
Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500
||||||||||||| || || | |||||| | || || || || || ||||| ||||
Sbjct 84621 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTTTCAAAAGGAT 84680
Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560
| | | |||||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 84681 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGGTGGC 84740
Query 71561 TCTTATTAGA 71570
||||| ||
Sbjct 84741 GTTTATTTGA 84750
Score = 93.3 bits (102), Expect = 6e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||| |||||||| |||||||||||||| | || || || || | | ||
Sbjct 89090 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTAGCACGCTGT 89149
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || |||||||| ||||| || | ||| |||||| | | || || ||||||| ||
Sbjct 89150 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 89209
Query 72142 TCCAAGTATATGGC 72155
|||| ||| || ||
Sbjct 89210 TCCAGGTAAATAGC 89223
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456
||||| | ||| | || |||| || ||||| || | ||| ||||| || || ||||||
Sbjct 95610 CTAGAAAGTTGTGGGCGGTTAGTACCAGCATTGAAGAGGGTGGGAGAGGCATGGGTAAAC 95669
Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATT 72516
|| || || || || || || || || |||||||| | || ||| | || || ||
Sbjct 95670 CACTTCTCGGAAAGAAGGTTATATGTTTCAATAGCAGCATCAATACCTTCTTTGTGAATC 95729
Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCA 72555
|| || | || | ||| ||||||||||| |||||||||
Sbjct 95730 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 95768
>seq1625
Length=211188
Score = 123 bits (136), Expect = 3e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 134438 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCT 134497
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||| || ||||| || |||||||||||||||||||| || || |||||||
Sbjct 134498 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGG 134557
Query 42207 C 42207
|
Sbjct 134558 C 134558
Score = 86.0 bits (94), Expect = 8e-12
Identities = 102/138 (74%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT 41775
||| |||||| |||| || | |||| ||| ||| | | ||||| |||||||| |
Sbjct 132994 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCCATCCT 133053
Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835
|| || || || || | || || || || |||||||| ||||||| ||| ||||| ||
Sbjct 133054 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAGATATTCTC 133113
Query 41836 CATGAAATCAAACGGATT 41853
||| || |||||||||||
Sbjct 133114 CATAAAGTCAAACGGATT 133131
Score = 86.0 bits (94), Expect = 8e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 42326 TCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCC 42385
|| |||| || || || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 136424 TCCTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 136483
Query 42386 ATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430
|| || || || |||||||| | ||| || |||| ||| ||||||
Sbjct 136484 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTCT 136528
>seq7358
Length=89575
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148
|||||||| || || | ||| |||||||| |||||||| ||||| || || | || ||
Sbjct 30052 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 30111
Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCA 42208
||||| ||||||| ||||| ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 30112 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 30171
Query 42209 ATAAGTCTCTCTCC 42222
| | ||| |||||
Sbjct 30172 ACCACTCTTTCTCC 30185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670360913426720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |