Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq41845 168 2e-37 >seq41845 Length=897 Score = 168 bits (186), Expect = 2e-37 Identities = 182/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 289 TGCTGATTACGTGTTGCTTCGCCTGGTGGAAATAGACCAGATGGATGTGATCGACATCCT 348 |||||| || ||| || |||||||| |||||||||||||||||||| ||||||| | Sbjct 407 TGCTGAATATGTGCTGAAGCGCCTGGTTGAAATAGACCAGATGGATGTTCTCGACATTAT 348 Query 349 TAACGATGACATGAGTATCAAGCCGGTTTCCGAATGGCCTAAGGTCTGGCGTCAGTATCT 408 | |||||||||||| || | |||||| ||||| |||||| ||||| | || || Sbjct 347 GACCGATGACATGAGCATAAGGCCGGTCTCCGACTGGCCTGCATCATGGCGGCGCTACCT 288 Query 409 TACCGGTTTCGAGCTGGCCGACATGTTCGAAGGCCGCGGCGACGAGAAAGAACTTGTTGG 468 | ||| ||||| || || || ||||| ||||| || || || | ||| | | || Sbjct 287 GAGCGGCTTCGACCTTGCTGATATGTTTGAAGGACGTGGTGAAAATCGGGAAATGATCGG 228 Query 469 CATACTCaaaaaaaTAAAATGGCCTGACAAGGTGAAGAACCTCGAGCTTATTGGTAAGCA 528 ||| || || ||||||||||||||||||||||| |||||||| || | | |||||||| Sbjct 227 CATCCTGAAGAAAATAAAATGGCCTGACAAGGTCAAGAACCTTGAATTGCTCGGTAAGCA 168 Query 529 C 529 | Sbjct 167 C 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126685880358312