Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_004813.1
Length=57930
Score E
Sequences producing significant alignments: (Bits) Value
seq59329 86.0 2e-12
seq65722 82.4 3e-11
>seq59329
Length=399
Score = 86.0 bits (94), Expect = 2e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18404 ATGCGTGATATCCGGCAGGTTCTTGAGCGCTGGGGGGCATGGGCGGCAAATAACCATGAG 18463
||||||||||| || ||||| | || || |||||||| |||| | |||| || ||
Sbjct 229 ATGCGTGATATTCGCCAGGTGTTAGAACGGTGGGGGGCTTGGGTTGTTGATAATCAGGAA 170
Query 18464 GATGTTACATGGTCGCCCATTGCTGCCGGATTTAAGGGACTGATCCCCGAAAAAGTAAAA 18523
|| ||||| || || |||||||| ||||| || |||||||| |||||||| ||
Sbjct 169 TCAGTATATTGGTCACCAATAGCTGCCGGGTTTAAAGGGCTGATCCCTGAAAAAGTTAAG 110
Query 18524 TCACGTCCACAGTGTTGTGACGATGACGCGATGATTATATGCGGGTGTATGGCTCGCCTT 18583
|| | | || |||| ||||| || || | |||| ||| |||||| ||
Sbjct 109 AGTCGGCAATCATGCAGTGATGATGATGCTCTGGTGATATCCGGCATTATGGCAAAACTG 50
Query 18584 AACAGGAACAACAGCGATCTGCATGACTTGCTGGTTGATTATTACGT 18630
|| | ||||| ||| ||||||| |||| |||| || || ||
Sbjct 49 AATATCCGTAACAGTGATATGCATGATCTGCTTTTTGACTACTATGT 3
>seq65722
Length=311
Score = 82.4 bits (90), Expect = 3e-11
Identities = 168/243 (69%), Gaps = 10/243 (4%)
Strand=Plus/Plus
Query 10251 GCTTCAGAATACCAGCCACATACTCCACCTTTGCTACTTGATGATAAGGCAAC-GTTATT 10309
|||| | ||| | |||||||| | || ||| | |||| | | | |||| || |||
Sbjct 72 GCTTTACAATCGCTGCCACATAATGCATTTTTTCCACTTCACGTGGAT-CAACTGTGATT 130
Query 10310 GGCCTGTGGTCCTGGTTGATGCTTGTAAATTGGTATTCTCCGTCTCTG-TCATAGCCAAG 10368
||| ||| | ||||| ||| || |||||||| || |||||| | || || |
Sbjct 131 GGCGGGTGAGTATTGTTGACGCTGGTGAATTGGTAACTACCATCTCTGGTTTTATTCA-G 189
Query 10369 AACTTTGATCATGTTGTGTCCTTCAACAGTTCTGACAAACACCTCATCACCCG---GGAA 10425
| ||| | ||| || | ||||||||||| | ||||| |||||||| || | ||
Sbjct 190 TATTTTTACCATATTCTTACCTTCAACAGTGCGCACAAAGACCTCATCGCCGGATCTGAC 249
Query 10426 TACTTTGGTGTTAGGCTCAATGAGTACATATTCTCCTGATTTTATTCTGGGCCACATGCT 10485
|||| ||||| ||||||| | ||||| || ||||| | || ||||||||||| ||
Sbjct 250 TACT---GTGTTGGGCTCAACAACCACATACTCACCTGACTGAATCCTGGGCCACATACT 306
Query 10486 GTC 10488
|||
Sbjct 307 GTC 309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185050311248288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |