Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_005340.1
Length=30636
Score E
Sequences producing significant alignments: (Bits) Value
seq39865 132 9e-27
seq75839 123 5e-24
seq80047 102 2e-17
>seq39865
Length=1072
Score = 132 bits (146), Expect = 9e-27
Identities = 143/187 (76%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 27552 TGACTGGCGTGAACAAAAGCGCCGCACTCGTGAATTTCTCAAAGGTCTGGATCTCGAAGA 27611
||| ||||| ||||||||||| || || ||||||||||||||| | |||| || ||||
Sbjct 885 TGAATGGCGGGAACAAAAGCGGCGGACACGTGAATTTCTCAAATCTATGGAACTGAAAGA 944
Query 27612 CGAAGACGGCAACCGTATCAGCCTGATTGAAAAATTTGACGGCTCGGTC-GCTAACCCTG 27670
|| || || ||||| ||||||||||||| ||||| | ||| | || || || || |
Sbjct 945 TGAGGAAGGAAACCGCGTCAGCCTGATTGATAAATTCTATGGC-AGTTCAGCAAATCCGG 1003
Query 27671 CGATACGCCGCTGCGAGCTGATGACCCGCATCCGTGGGTTTGAAAATATCTGCAATGAAC 27730
|||| ||| | || ||||| || || | |||||||||||||||||||||||||
Sbjct 1004 CGATCCGCAGAACTGAAATGATGGTGCGGATAAGAGGGTTTGAAAATATCTGCAATGAAC 1063
Query 27731 TCGGATA 27737
|||| ||
Sbjct 1064 TCGGCTA 1070
>seq75839
Length=248
Score = 123 bits (136), Expect = 5e-24
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 27763 GCACCGTCTAAATATCATGCCACGACTAAAGCGGGATACCGTAACAGCAAATGGAACGGC 27822
||||| || |||||||| || |||||| || |||||||| |||||||||||||
Sbjct 3 GCACCATCAAAATATCACGCGACGACTCGTCACGGGCACCGTAACCGCAAATGGAACGGA 62
Query 27823 GCCAGCCCGTCGGACACGCAGAACTACCTAACCGGCCTTTGGGCGCGCATTCGTGCCAAG 27882
||||||| | ||||||||||| ||||| | | ||| ||||| || ||
Sbjct 63 AGCAGCCCGGCAGACACGCAGAAATACCTCAGTAAAGTATGGAGTAAAATTCGGGCGAAA 122
Query 27883 CTACATCGGGAAGAAATTCGCATTTTCGGCATACGTGTTGCCGAGCCTCATCACGACGGA 27942
|| || ||||| || | || || || || || || ||||| |||||||| || ||||||
Sbjct 123 CTTCACCGGGATGATTTACGGATCTTTGGTATTCGCGTTGCAGAGCCTCACCATGACGGA 182
Query 27943 ACGCCGCATTGGCACATGCTTATGTTCATGTTGCCAGAAGA 27983
|| ||||| ||||| |||||| | || ||| || |||||
Sbjct 183 ACCCCGCACTGGCATATGCTTTTCTTTATGCGCCCGGAAGA 223
>seq80047
Length=232
Score = 102 bits (112), Expect = 2e-17
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 28003 ATCATCCGCGATTATGCATGGGAGGAAGACCGCCACGAACTTAAAAGTGATAAGGCTAAA 28062
||| | || || ||||| | ||||||| ||||||||| | | ||| ||
Sbjct 55 ATCCTGCGTGACTATGCCTATCAGGAAGATTTCCACGAACTGACCACACGTAAAGCGCTG 114
Query 28063 AAAGCCCGCTTTCATGCTGAGGCTATCGACCCGGAGAAAGGCAGTGCTACCGGCTATGTC 28122
||||| || ||||||||||| | ||| || ||||| ||||| |||||| |||||||||
Sbjct 115 AAAGCACGGTTTCATGCTGAAGTTATAGATCCGGATAAAGGTTCTGCTACGGGCTATGTC 174
Query 28123 GCGAAATACATTTCTAAAAACATCGACGGTTATGCTCTCGATGGTGAAACCGATGA 28178
|| |||||||| || |||||| | || || || || | |||| ||||| |||||
Sbjct 175 GCCAAATACATATCAAAAAACGTTGATGGGTACGCAATGGATGATGAAAAGGATGA 230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97805731769072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |