Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_005857.1
Length=51601
Score E
Sequences producing significant alignments: (Bits) Value
seq42976 161 3e-35
>seq42976
Length=315
Score = 161 bits (178), Expect = 3e-35
Identities = 222/307 (72%), Gaps = 4/307 (1%)
Strand=Plus/Plus
Query 15411 AGTCCGTAGCAAAAGCCAAAATTCTCATCGCGCTGGGCGAGGGAGAATTTGCAGGTGAAT 15470
||||||| || ||||| ||| | || ||||| || || || || |||||||| || ||
Sbjct 1 AGTCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGC 60
Query 15471 TAACGGGCAAGGATATTTATCTAGATGGTACCCCGCTATTAAATGCCGATGGGTCAGAGA 15530
| || || || |||| | ||| || ||||| |||||| | ||||| || || ||||| |
Sbjct 61 TGACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAA 120
Query 15531 ACTTTTCCGGCGTGGCGTGGGAATTTCGTCCCGGAACACAGGCCCAAAAATATATTCAAG 15590
||||| | || |||| |||||||| ||||||||||| ||||| |||| || ||||| |
Sbjct 121 ACTTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGG 180
Query 15591 GCATTCCCGGCACTGAAAATGAAATCAGTGTCGGAACAGAAATATCCAGCGAAAC-CGCC 15649
| || || | | || |||||||| | || || || | | | ||| | | | ||||
Sbjct 181 GGATGCCGGCGGCGGAGAATGAAATTACCGTTGGTAC--CACTGTGCAGAGCAGCACGCC 238
Query 15650 -TGGAGCCATACGTTTACAAATACTCAGCTATCTGCCGTCCGAGTCCGTCTGAAGTGGCC 15708
||| ||| | || || ||| | ||||| || || |||| ||||| ||||| |||||
Sbjct 239 GTGGGCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCC 298
Query 15709 TTCACTG 15715
|| |||
Sbjct 299 GTCCCTG 305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164819823099832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |