Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq42976 161 3e-35 >seq42976 Length=315 Score = 161 bits (178), Expect = 3e-35 Identities = 222/307 (72%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 15411 AGTCCGTAGCAAAAGCCAAAATTCTCATCGCGCTGGGCGAGGGAGAATTTGCAGGTGAAT 15470 ||||||| || ||||| ||| | || ||||| || || || || |||||||| || || Sbjct 1 AGTCCGTTGCCAAAGCGAAATTGCTGATCGCCCTCGGGGAAGGGGAATTTGCCGGGGAGC 60 Query 15471 TAACGGGCAAGGATATTTATCTAGATGGTACCCCGCTATTAAATGCCGATGGGTCAGAGA 15530 | || || || |||| | ||| || ||||| |||||| | ||||| || || ||||| | Sbjct 61 TGACCGGGAAAAATATCTTTCTGGACGGTACACCGCTACTGAATGCTGACGGATCAGAAA 120 Query 15531 ACTTTTCCGGCGTGGCGTGGGAATTTCGTCCCGGAACACAGGCCCAAAAATATATTCAAG 15590 ||||| | || |||| |||||||| ||||||||||| ||||| |||| || ||||| | Sbjct 121 ACTTTCCTGGGGTGGTGTGGGAATACCGTCCCGGAACTCAGGCGCAAATCTACATTCAGG 180 Query 15591 GCATTCCCGGCACTGAAAATGAAATCAGTGTCGGAACAGAAATATCCAGCGAAAC-CGCC 15649 | || || | | || |||||||| | || || || | | | ||| | | | |||| Sbjct 181 GGATGCCGGCGGCGGAGAATGAAATTACCGTTGGTAC--CACTGTGCAGAGCAGCACGCC 238 Query 15650 -TGGAGCCATACGTTTACAAATACTCAGCTATCTGCCGTCCGAGTCCGTCTGAAGTGGCC 15708 ||| ||| | || || ||| | ||||| || || |||| ||||| ||||| ||||| Sbjct 239 GTGGGCGCATGCATTCACCAATCCGCAGCTGTCCGCTATCCGCGTCCGCCTGAAATGGCC 298 Query 15709 TTCACTG 15715 || ||| Sbjct 299 GTCCCTG 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164819823099832