Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq1509 165 1e-35
seq7786 120 4e-22
>seq1509
Length=219255
Score = 165 bits (182), Expect = 1e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693
||||| || | || || || |||||||||||| ||| |||| || ||||| || |||
Sbjct 162864 GTCTGGAATAACTGCTCATCGTCCCATTCTGGATGCTCTTGTTTAAGTACATCACATACT 162805
Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753
||||| ||||||| ||||| || || || |||||||| ||||||||||||||||||||
Sbjct 162804 CTGTTATGTTCCCGAAGCCAAATTGTGGCATACATCATCAGACCAGGCACCAGGCCAAAG 162745
Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813
|||| || || ||||| | ||| || ||| || || | || || |||||||| |
Sbjct 162744 ACCTCCTGGCCCACAGCAAACTGCAGATGTTCAGGGACGTGAGGCGGGTAGATCATCTTG 162685
Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATCT 9862
||||| ||||||||| | ||| |||||||| || || |||| ||||
Sbjct 162684 ACCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAACTATCT 162636
Score = 123 bits (136), Expect = 4e-23
Identities = 121/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087
|||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | ||
Sbjct 161698 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGTCCTCGCCTATGATCTGTCTTGAA 161639
Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147
||| || || ||||| || ||| |||| || |||||||| | || ||||||||||||||
Sbjct 161638 AAATTGATGTGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 161579
Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCAC 10183
|| |||| | |||| |||||| |||||||||
Sbjct 161578 AGGGATGAACTTTCTCCTTAGAAGAAATTTTTCCAC 161543
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346
|||||||| || || | || ||||| || | || || || ||||| ||| || |
Sbjct 161093 TCACCTTTCACACCCATGGGTGTTGGGCAGTTGTCAGCCACAGGAGGAAGAGCTCTGGTA 161034
Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406
|||||||| ||||| || || |||||||||||| ||| | |||| || ||||| |
Sbjct 161033 TAATAGGAAAGATTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGTGCATTGTAAGTT 160974
Query 10407 GGAGGGCTGTCAATCAAATCGGATCT 10432
|| |||||| ||||||||| |||||
Sbjct 160973 GGTGGGCTGGCAATCAAATGTGATCT 160948
>seq7786
Length=85644
Score = 120 bits (132), Expect = 4e-22
Identities = 168/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
||||||| || || |||| || || || || ||||| || |||||||| | || |
Sbjct 27091 TCTTGACAATGTTGAAGCCCATCTCGCCCCCAAATGTGCTCGGCTTCCAGTACTCTGGAG 27032
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
| |||||| |||| ||| |||||| ||||||||||| || ||||| | || | || |
Sbjct 27031 AACAGATGGGGTTCCCCAGGAGGCCCTTGAGGGAAAAGGGGGCCCCGATTTCTATCATAC 26972
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
|||| || ||||||| ||| ||| || || || | | | || | ||| |||||||
Sbjct 26971 TCTCCCCAAAGATGGAGTTCGGATGGCATTTCTCGAGAAGCAGCCCCGGGTAGAACTCCA 26912
Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974
||| || |||||||| || || || ||||| | || || ||||| ||||||
Sbjct 26911 AAGCATCAATGTCTCCATATAGATCCTCCAGTTCAGTTGCCATCTCCTTCTCTCCT 26856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 707703159215680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |