Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 320 2e-82
seq2665 131 2e-25
seq1625 120 4e-22
seq7358 111 2e-19
>seq20608
Length=25523
Score = 320 bits (354), Expect = 2e-82
Identities = 635/937 (68%), Gaps = 15/937 (2%)
Strand=Plus/Plus
Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 33014
||| |||||| |||| || | |||| ||| ||| | | |||| ||||| || |
Sbjct 8851 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTTGACACCACTCCTATCCT 8910
Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074
|| | || || | || || || || ||||| || |||||| || ||| | ||
Sbjct 8911 CCTATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCACTTCCAGGGAGATAGTCTC 8970
Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134
||| || ||||| ||||| || || ||| || |||| ||| || || |
Sbjct 8971 CATAAAGTCAAAAGGATTTTCTACTCTAAAAACCTTGCTAAAATCCAGCTCCAGCATAAG 9030
Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194
||| || || |||||||| ||||| ||||| | |||||||| || | || ||
Sbjct 9031 TCTGTCTGCCACGAATTCAATATACTACTTCATTAAAGTACAATTCACCCCAGTGAGCTT 9090
Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254
||||| | ||| | || || || || ||||| || || | || | || ||
Sbjct 9091 TACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTAACAGAATTGATGATGATTTC 9150
Query 33255 TCTAACGGTTTCTTCACTC----GGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| | || ||| ||| ||| |||| | |||||||||||| || || |
Sbjct 9151 TTTCAC----TCTCGGCTCCAAAGGTTTGTGCAGCAGGTGTTTAAACATCGGGCAGGCAA 9206
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| || ||||| | ||| | ||||| ||||| ||||| |||||||| ||||| || ||||
Sbjct 9207 AGTCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCA 9266
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
|| || | || || ||||| ||||| || || || || |||||||||||||||||||
Sbjct 9267 CGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTT 9326
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33487
| || | ||||||||| | | | |||||| | | | | |||| |||||
Sbjct 9327 CCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCAATCCAAG 9386
Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547
||||||||| |||||||| ||||||| ||||||| | || |||||||| ||||||
Sbjct 9387 GCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTGAAGAGAA 9446
Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607
| || |||| || || |||| ||||| || || | |||||| ||||||| |||
Sbjct 9447 ATTTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACATTTCAGAAC 9506
Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667
| |||||||| ||||| || || || || |||||||| || || |||||||| ||||
Sbjct 9507 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATCTGAACTT 9566
Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727
|| | ||| | ||| |||| |||||||| ||||| || ||||| | |||||| || |
Sbjct 9567 CTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCAAAGAAAG 9626
Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33787
||| ||||| |||||||||| | || || | ||| | ||| | | || |
Sbjct 9627 CCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCTAGGGCTTCCCAGTGCTGAATGT 9686
Query 33788 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGT 33847
| ||||| | | | || || || ||| |||||| || ||||| || |||||||| |
Sbjct 9687 CCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTTCTTATACATCT 9745
Query 33848 TCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
||| || |||| |||| ||| | || || |||||
Sbjct 9746 GCCAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq2665
Length=168205
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396
|| ||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 80467 ACCTGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATG 80526
Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 80527 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 80586
Query 62457 CTATTTCTAAGACCGTA 62473
|| ||||| | ||| ||
Sbjct 80587 CTGTTTCTTATACCATA 80603
Score = 109 bits (120), Expect = 7e-19
Identities = 139/189 (74%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121
|||| || || || ||||||||||| |||||| ||| | || || || |||||||| |
Sbjct 77642 TCCAGCCATAGAAGTGCATACTCGTAAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 77701
Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181
||| ||| || |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 77702 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTTTCGGCTGCCATCTTGAGAACAGTTT 77761
Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62240
| || | |||||||| | ||| ||||||| | |||| | || || |||| | |||||
Sbjct 77762 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTTGTA 77821
Query 62241 T--TCTGAA 62247
| ||||||
Sbjct 77822 TGCTCTGAA 77830
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271
|| |||||||||||| |||||||| |||||||||||||| | || || || || | |
Sbjct 89086 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTAGCACG 89145
Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 89146 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 89205
Query 63332 CGGTTCCAAGTATATGGC 63349
|| |||| ||| || ||
Sbjct 89206 AGGCTCCAGGTAAATAGC 89223
Score = 82.4 bits (90), Expect = 9e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634
|||| || || ||||| | | | || || |||||||| || || || || || || |
Sbjct 84561 CATAGGTTTCATATGGGTCATGTTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 84620
Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694
||||||||||||| ||||| | |||||| | || || || | || ||||| ||||
Sbjct 84621 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTTTCAAAAGGAT 84680
Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754
| | | |||||||| || || || | ||||| || ||||| || || || | || |
Sbjct 84681 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGGTGGC 84740
Query 62755 TCTTATTAGA 62764
||||| ||
Sbjct 84741 GTTTATTTGA 84750
>seq1625
Length=211188
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || |
Sbjct 134438 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCT 134497
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| ||||| ||||| || || || || |||||||||||||||||||| || || |||||||
Sbjct 134498 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGG 134557
Query 33446 C 33446
|
Sbjct 134558 C 134558
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624
|| |||| ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 136424 TCCTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 136483
Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684
|| || || || |||||||| | || || |||||||| |||||| | ||| || |||
Sbjct 136484 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTCTTGGCTAAACCGCTCC 136543
Query 33685 GCC 33687
||
Sbjct 136544 ACC 136546
>seq7358
Length=89575
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387
|| ||||| || || ||||| |||||||| |||||||| ||||| || || | || ||
Sbjct 30052 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 30111
Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447
||||| ||||| | ||| || ||||| || ||||| ||||||||||| |||||||| ||
Sbjct 30112 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 30171
Query 33448 ATAAGTCTCTCTCC 33461
| | ||| |||||
Sbjct 30172 ACCACTCTTTCTCC 30185
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745
|||||||||||||||| ||||| |||||||| ||||| || || || | ||| ||||
Sbjct 39775 CCAAATTTTCATTCACAATTCCATCACTGGCGGCAAAGAAAGCTAAGATATGAGAAATAA 39834
Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33796
||||||| || |||| | | || || ||||| | | || ||| || ||||
Sbjct 39835 AATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 39885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622224799279520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |