Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2665 96.9 9e-15
seq1625 87.8 5e-12
seq20608 84.2 6e-11
>seq2665
Length=168205
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 87986 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 87927
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 87926 CTTTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGC 87867
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 87866 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 87834
>seq1625
Length=211188
Score = 87.8 bits (96), Expect = 5e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||| | | || ||||| | ||| ||||| || ||||||||||| | ||| |
Sbjct 134570 GAACGTGTGGTAGCCTTTGCCGCGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCG 134511
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| || ||||| || ||||| | | | ||||| ||||| || ||||| ||||| | |||
Sbjct 134510 ATATTCTGGCTCAAGAAACGAGGACTCATGCCTGGTCTCACATTTTCCAATGAACTTATT 134451
Query 22609 AGCCGAGATGAGG 22621
||| |||||||||
Sbjct 134450 AGCAGAGATGAGG 134438
>seq20608
Length=25523
Score = 84.2 bits (92), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT--GA-ACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || ||||| || |||| || | | | | |||
Sbjct 9411 AAGAAGAAGGCAGATTGGGCTTTGCCTTGGATTGGAGACAAAGAGGCTACCTGTGGAGAA 9352
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
||| | | || |||||| ||| ||||| || ||||||||||| | ||| ||||
Sbjct 9351 CGTGTGGTAGCCTTTGCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATA 9292
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|| ||||| || || | | | | |||| ||||| || ||||| ||||| | ||||||
Sbjct 9291 TTCTGGCTCAAGAATCAAGGACTCGTGCCTGGTCTCACATTTTCCAATGAACTTATTAGC 9232
Query 22612 CGAGATGAGGGT 22623
||||| | |||
Sbjct 9231 AGAGATAAAGGT 9220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1301804380147704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |