Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 93.3 4e-14
>seq4400
Length=129001
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | || || || || | || || || | || ||| | || || ||| |
Sbjct 39893 CAAAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCC 39952
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| ||| ||||||||| | || || ||||| || ||||||||||| ||||||||
Sbjct 39953 CAGCGATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGA 40012
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|| ||||| || || | | |||||||| || || |||| | | | || ||||||
Sbjct 40013 CCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTA 40072
Query 24167 TAACATTCAAAAAGAATCTAC 24187
||||| || ||||| || ||
Sbjct 40073 CAACATCCAGAAAGAGTCGAC 40093
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| | || || ||| ||| |
Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||||||| | || || ||||| || ||||||||||| |||||||| ||
Sbjct 40185 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40244
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | | |||||||| || || |||| | | | || |||||| |||
Sbjct 40245 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40304
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || ||||| || ||
Sbjct 40305 ATCCAGAAAGAGTCGAC 40321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429449889099660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |