Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq7636 118 7e-22
seq7612 93.3 3e-14
seq13280 89.7 3e-13
seq5134 89.7 3e-13
seq33536 86.0 4e-12
seq10633 86.0 4e-12
>seq7636
Length=87160
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG-----GGGTAATCTCGT 25956
|||||||||||||||||||||||||| || |||||||| |||| || ||||||||
Sbjct 46481 AAGCCCGTTCCCTTGGCTGTGGTTTCACTGGATAGTAGGTAGGACAGTGGAGAATCTCGT 46422
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 46421 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 46387
>seq7612
Length=87096
Score = 93.3 bits (102), Expect = 3e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGT 20009
||| ||| |||| ||||||| ||||||||||||||||| |||| ||||||||||| |||
Sbjct 81405 TCTATTCGAAGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCGGG 81346
Query 20010 AATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 81345 AGTATTTAGCCTTA 81332
>seq13280
Length=50216
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||| |
Sbjct 50078 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATCAGTCTTGT 50137
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 50138 GCCGGTATTTAGCCTTA 50154
>seq5134
Length=116349
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||| ||||||||| | |||||||||| |||| |||||||
Sbjct 51843 CTCTCTCTTCAAAGTCCTTTTCTACTTTCCCTTATGGTACTTGTTGACTATTGGTCTCGT 51784
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 51783 GCTGGTATTTAGCCTTA 51767
>seq33536
Length=4287
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| |||||| | || |||| |||||||
Sbjct 828 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTATGTATTGACTATTGGTCTCGT 769
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 768 GCCGGTATTTAGCCTTA 752
>seq10633
Length=64552
Score = 86.0 bits (94), Expect = 4e-12
Identities = 92/119 (77%), Gaps = 11/119 (9%)
Strand=Plus/Plus
Query 19910 TATTATTCATTGTACTTAATTGCGGTTATTGTCATTTCT---CTCTCTTCAAAGTTCTTT 19966
|||| ||| || | |||||| ||||| | |||| | ||||||||||||||||||
Sbjct 11417 TATTTTTCTTTTT--TTAATT----TTATTTTTATTTTTATTCTCTCTTCAAAGTTCTTT 11470
Query 19967 TCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATT--TAGCCTTA 20023
|||||||||| | |||||||||||| || ||||||| | | | |||| ||||||||
Sbjct 11471 TCAACTTTCCTTTACGGTACTTGTTGACTGTCGGTCTTGTGCCAGTATTTATAGCCTTA 11529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334568489017532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |