Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 295 8e-75
seq2665 131 2e-25
seq1625 114 2e-20
seq7358 107 2e-18
>seq20608
Length=25523
Score = 295 bits (326), Expect = 8e-75
Identities = 426/599 (71%), Gaps = 4/599 (1%)
Strand=Plus/Plus
Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705
|||||||||||| || || || || ||||||| ||| | ||||| ||||| | |||
Sbjct 9185 TGTTTAAACATCGGGCAGGCAAAGTCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCA 9244
Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765
|||||||| ||||| || |||| || || | || || ||||| ||||| || |||||
Sbjct 9245 TTGGAAAATGTGAGACCAGGCACGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAA 9304
Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 32822
|| ||||||||||| |||||||| || | |||||||| | | | |||||| | |
Sbjct 9305 GAACCAGAAAAGAAGATTCCTTCCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTA 9364
Query 32823 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882
| | |||| ||||| ||||||||| |||||||| ||||||| ||||||
Sbjct 9365 GCCTCTTTGTCTCCAATCCAAGGCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATC 9424
Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942
|||| || ||||| |||||| | || |||| || || |||| || || |||||
Sbjct 9425 ATCTCAATGGCATTGAAGAGAAATTTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATG 9484
Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002
| |||||| ||||||| ||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct 9485 AGGAGACTAAACATTTCAGAACGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAG 9544
Query 33003 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33062
|| || |||||||| |||||| | ||| | || | || |||||||| |||||
Sbjct 9545 AGGGCTTCTGTAATCTGAACTTCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATG 9604
Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122
|| ||||| | |||||| || |||| ||||| |||||||||| | || || | |
Sbjct 9605 CCATCACTTGTTGCAAAGAAAGCCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCT 9664
Query 33123 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 33182
|| | ||| | | || || ||||| | | |||| || || ||| |||||| ||
Sbjct 9665 AGGGCTTCCCAGTGCTGAATGTCCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAA 9723
Query 33183 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
||||| || |||||||| | ||| || ||||| |||| || |||| || |||||
Sbjct 9724 GCCTCCATTTTCTTATACATCTGCCAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq2665
Length=168205
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251
|| ||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| |
Sbjct 80467 ACCTGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATG 80526
Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 80527 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 80586
Query 62312 CTATTTCTAAGACCGTA 62328
|| ||||| | ||| ||
Sbjct 80587 CTGTTTCTTATACCATA 80603
Score = 114 bits (126), Expect = 2e-20
Identities = 140/189 (74%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976
|||| || || || ||||||||||| |||||| ||| | || || || |||||||| |
Sbjct 77642 TCCAGCCATAGAAGTGCATACTCGTAAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 77701
Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036
||| ||| || |||||||| ||||| || || || || || ||||| || | || || |
Sbjct 77702 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTTTCGGCTGCCATCTTGAGAACAGTTT 77761
Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62095
| || | |||||||| | ||| ||||||| | |||| | || || |||| | |||||
Sbjct 77762 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTTGTA 77821
Query 62096 T--TCTGAA 62102
| ||||||
Sbjct 77822 TGCTCTGAA 77830
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| |||||||||||| |||||||| |||||||||||||| | || || || || | |
Sbjct 89086 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTAGCACG 89145
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
||||| || |||||||| ||||| || | ||| |||||| | | || || |||||||
Sbjct 89146 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 89205
Query 63187 CGGTTCCAAGTATATGGC 63204
|| |||| ||| || ||
Sbjct 89206 AGGCTCCAGGTAAATAGC 89223
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| || | ||| |||||||||||||| | || || || || || || || || || |
Sbjct 99856 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGA 99915
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
||||||| || || || | |||||| | || || ||| |||| || |||| ||| || |
Sbjct 99916 TGGCATAGTCAGGGTGCTTTGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTA 99975
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
||| || || || || ||| | |||| || || || || |||||
Sbjct 99976 GTTCCACAGTGGTGACCCCACTGTATAAGCCCTGAATTACTTTCAT 100021
Score = 86.0 bits (94), Expect = 8e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489
|||| || || ||||| | | | || || |||||||| || || || || || || |
Sbjct 84561 CATAGGTTTCATATGGGTCATGTTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 84620
Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549
||||||||||||| ||||| | |||||| | || || || | || ||||| ||||
Sbjct 84621 AATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTTTCAAAAGGAT 84680
Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62609
| | | |||||||| || ||||| | ||||| || ||||| || || || | || |
Sbjct 84681 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGGTGGC 84740
Query 62610 TCTTATTAGA 62619
||||| ||
Sbjct 84741 GTTTATTTGA 84750
>seq1625
Length=211188
Score = 114 bits (126), Expect = 2e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 134438 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCT 134497
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| ||||| || ||||| || ||||||||||| |||||||| || || |||||||
Sbjct 134498 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGG 134557
Query 32803 C 32803
|
Sbjct 134558 C 134558
Score = 91.5 bits (100), Expect = 2e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981
|| |||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 136424 TCCTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 136483
Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026
||||| || || ||||| || | || || |||||||| ||||||
Sbjct 136484 ATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTCT 136528
>seq7358
Length=89575
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744
|| ||||| || || | ||| |||||||| |||||||| ||||| || || | || ||
Sbjct 30052 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 30111
Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 32804
||||| ||||| | ||||| ||||| || ||||||||||||||||| || ||||| ||
Sbjct 30112 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 30171
Query 32805 ATAAGTCTCTCTCC 32818
| | ||| |||||
Sbjct 30172 ACCACTCTTTCTCC 30185
Score = 82.4 bits (90), Expect = 1e-10
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218
|| ||||| ||||||| || ||||||| ||||||||||||||| ||||| || || |
Sbjct 43521 ACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCGGGG 43580
Query 33219 TATTGAATTGGAAAAATAACAAATC 33243
|| || |||||||| || |||||||
Sbjct 43581 TACTGGATTGGAAAGATGACAAATC 43605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632897208651200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |