Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 226 3e-54
seq1625 100 3e-16
>seq20608
Length=25523
Score = 226 bits (250), Expect = 3e-54
Identities = 423/611 (69%), Gaps = 8/611 (1%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT-CATTGCTGAATGTTA 93149
||| |||||||| |||||||||| |||| || || || | ||||| ||||| |
Sbjct 9199 GCAGGCAAAGTCACAGTGTAAACCTTTATCTC-TGCTAATAAGTTCATTGGAAAATGTGA 9257
Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209
||| || | |||||| | ||||||||||| |||||||| |||||| ||||||||| |
Sbjct 9258 GACCAGGCACGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGA 9317
Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269
| || |||||||| | ||||| || || | |||||| || | | || || |
Sbjct 9318 AGATTCCTTCCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTC 9377
Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329
||||| ||||||||||| || || ||||| | || ||| | | || || || |
Sbjct 9378 CAATCCAAGGCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCAT 9437
Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389
| || || | | | || | || || ||||| || || || | ||| | |||
Sbjct 9438 TGAAGAGAAATTTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACA 9497
Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449
|||||||| | | || ||||| ||||||||||| || |||||||| ||||| || |
Sbjct 9498 TTTCAGAACGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAA 9557
Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509
|||| |||||||| ||| | ||| || | |||||||| ||||| ||||| || ||
Sbjct 9558 TCTGAACTTCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTG 9617
Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC-ATCTTTAAGCTTATCCCAA 93568
|||| ||||||| | ||| |||||||| | |||| || | || || | | |||||
Sbjct 9618 CAAAGAAAGCCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCTAGGGCT-TCCCAG 9676
Query 93569 T-CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
| | || | || || || ||| | || || || | | |||||| || || || |||
Sbjct 9677 TGCTGA-ATGTCCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTT 9734
Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTT 93687
|| ||||| | ||| || || || |||| || |||| ||||||||||| | ||||
Sbjct 9735 CTTATACATCTGCCAAATATCATGGTATTCGATAAGAAAGATGACAAAACGGCAAAGGTT 9794
Query 93688 ATCTTTTAGTA 93698
| | ||||||
Sbjct 9795 -TTTCTTAGTA 9804
>seq1625
Length=211188
Score = 100 bits (110), Expect = 3e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
|||||| ||||| | ||| || | |||||||||||||||||||| ||||| || |||
Sbjct 134458 TCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 134517
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
||| ||||||||| || || |||||||| || ||||| || || | ||||||
Sbjct 134518 AAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGGCTACCACACGTTC 134570
Score = 93.3 bits (102), Expect = 5e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || || || | ||| ||||||||||||||| | || ||||| |||||||||
Sbjct 136430 ATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 136489
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
|| || |||||||| | ||||| || ||||||||||||||
Sbjct 136490 AAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTCTTG 136530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556215036373280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |