Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7134 105 6e-18 seq4400 102 7e-17 seq7041 93.3 4e-14 >seq7134 Length=91468 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || |||||||| || |||| || || ||||| ||| Sbjct 86987 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87046 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||||||||||||| || || || || || Sbjct 87047 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 87106 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| |||||| | || || |||||| | || || |||||| Sbjct 87107 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 87166 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| |||||| Sbjct 87167 ATCCAGAAAGAGTCCACC 87184 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || |||||||| || |||| || || ||||| ||| Sbjct 86531 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86590 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||||||||||||| || || || || || Sbjct 86591 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86650 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | || || |||||| | || || |||||| Sbjct 86651 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86710 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 86711 ATCCAGAAGGAGTCCACC 86728 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || |||||||| || |||| || || ||||| ||| Sbjct 86759 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 86818 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||||||||||||| || || || || || Sbjct 86819 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 86878 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | || || |||||| | || || |||||| Sbjct 86879 CAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGTCTGACTACAAC 86938 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 86939 ATCCAGAAGGAGTCCACC 86956 >seq4400 Length=129001 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| || || || || || | ||||| || || |||| || || ||||| Sbjct 39891 GTCAAAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAG 39950 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| ||||||| | || | | || || || || || || || || || || ||| Sbjct 39951 CCCAGCGATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCC 40010 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||| ||||| ||| | |||||| |||||| |||||||| Sbjct 40011 GACCAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGAT 40070 Query 22393 TACAACATTCAAAAAGAATCCACC 22416 |||||||| || ||||| || ||| Sbjct 40071 TACAACATCCAGAAAGAGTCGACC 40094 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| | Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || || || || || || ||||| || Sbjct 40185 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40244 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | |||||| |||||| |||||||||||||| Sbjct 40245 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40304 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 40305 ATCCAGAAAGAGTCGACC 40322 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| ||| | Sbjct 40353 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40412 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || || || || || || || || || || || || || Sbjct 40413 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCAGACCAG 40472 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | |||||| |||||| |||||||||||||| Sbjct 40473 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40532 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| || ||| Sbjct 40533 ATCCAGAAAGAGTCGACC 40550 >seq7041 Length=99228 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || | ||| || || | || || || || | || ||||| || | || Sbjct 76381 AGATGCAGATCTCTGTGAAGACCCTGACAGGCAAGACCATAACCCTTGAGGTTAAGCTCA 76440 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || || ||||| ||||| ||||||||||| || || ||||| || Sbjct 76441 GTGACACCACTGAGAATGTCAAATCTAAAATCCAAGACAAGGAAGGCATCCCACCTGACT 76500 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || |||| || ||||| ||||||| | |||||||| |||||| |||| || |||| Sbjct 76501 AGCAGTGTCTGATTTTTGCAGGCAAACGGATAGAGGATGGCCGCACTCTCTCAGACTACA 76560 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || | |||||| | || || || Sbjct 76561 GGATTCAGGAAAAGTCCACCCTGCACTTGGT 76591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419253430864180