Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 176 8e-39
seq7134 167 4e-36
seq66 143 5e-29
seq7041 109 1e-18
>seq4400
Length=129001
Score = 176 bits (194), Expect = 8e-39
Identities = 166/209 (79%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || || |||||||| |||||||| ||||||||||| || | ||||| || | |||
Sbjct 40100 GTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCCAGCTG 40041
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || ||||| || || |||||||| || |||||||| || || || |||||
Sbjct 40040 CTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTT 39981
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCCCG 68436
||||| ||| ||||||||| || |||| || || |||| ||||||||| || || |
Sbjct 39980 GGCCTTCACGTTCTCGATGGTATC-GCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGG 39922
Query 68437 TGAGGGTCTTGACGAATATCTGCATTATG 68465
|||||||||| ||||| ||||||||| ||
Sbjct 39921 TGAGGGTCTTCACGAAGATCTGCATTTTG 39893
Score = 176 bits (194), Expect = 8e-39
Identities = 172/219 (79%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || || |||||||| |||||||| ||||||||||| || |
Sbjct 40570 AGACGCAGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGG 40511
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || || || ||||| || || ||||| || || ||||||||
Sbjct 40510 CCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCT 40451
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGT 68422
|| || || ||||| ||||| ||| ||||||||| || |||| || || |||| |||
Sbjct 40450 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATC-GCTGGGCTCCACCTCCAGGGT 40392
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || ||||||||||| ||||| ||||||||
Sbjct 40391 GATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40353
Score = 174 bits (192), Expect = 3e-38
Identities = 163/205 (80%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || || |||||||| |||||||| ||||||||||| || | ||||| || | |||
Sbjct 40328 GTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCCAGCTG 40269
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || ||||| || || |||||||| || |||||||| || || || |||||
Sbjct 40268 CTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTT 40209
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTTTCCCG 68436
||||| ||| ||||||||| || |||| || || |||| ||||||||| || || |
Sbjct 40208 GGCCTTCACGTTCTCGATGGTATC-GCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGG 40150
Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||| ||||| ||||||||
Sbjct 40149 TGAGGGTCTTCACGAAGATCTGCAT 40125
>seq7134
Length=91468
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | ||| | |||||||| | ||||||||||| |||||||| || || ||
Sbjct 87441 CCTCCCCTCAAGCGGAGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 87382
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||||||||| || || || || || ||||| || ||
Sbjct 87381 AGAGTGCGTCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 87322
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || || ||||| |||||||| |||||||||||| | || ||
Sbjct 87321 ATGCCCTCCTTATCATGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 87262
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || || | |||||| ||||| ||||||||
Sbjct 87261 TCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 87215
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || |||||||| || |||||||| || || || || || |
Sbjct 86748 AGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86689
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | |||||||||||| || || | || || ||||| || || ||||| |||
Sbjct 86688 CCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 86629
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| |||||||| |||||||||||| | || || |||| ||||
Sbjct 86628 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86569
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || | |||||| ||||| ||||||||
Sbjct 86568 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86531
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || |||||||| || |||||||| || || || || || |
Sbjct 86976 AGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86917
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | |||||||||||| || || | || || ||||| || || ||||| |||
Sbjct 86916 CCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 86857
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| |||||||| |||||||||||| | || || |||| ||||
Sbjct 86856 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86797
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || | |||||| ||||| ||||||||
Sbjct 86796 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86759
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || |
Sbjct 87204 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGG 87145
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 87144 CCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 87085
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| |||||||| |||||||||||| | || || |||| ||||
Sbjct 87084 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 87025
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || || || | |||||| ||||| ||||||||
Sbjct 87024 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987
Score = 147 bits (162), Expect = 4e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || ||||||||||| |||||||| || || || || || |
Sbjct 86520 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86461
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|| ||||| | ||| |||||||| || || | || || ||||| || || ||||| ||
Sbjct 86460 CCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCT 86401
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|| ||||| ||||| |||||||| |||||||||||| | || || |||| ||||
Sbjct 86400 TTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86341
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| || || || | || || ||||| |||||||||
Sbjct 86340 ATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCATT 86302
>seq66
Length=542294
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | | ||| | |||||||| | ||||||| || |||||||| || || |
Sbjct 261595 CCTCCCCTCAAGCGGAGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAAC 261654
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || |||||||| ||||||||||| || || || | || || ||||| || ||
Sbjct 261655 AGAGTGTGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 261714
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||| ||||| |||||||| ||||||||||| | || ||
Sbjct 261715 ATGCCCTCCTTATCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGGGCTCCACC 261774
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || || |||||||| || || ||||||||
Sbjct 261775 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 261821
>seq7041
Length=99228
Score = 109 bits (120), Expect = 1e-18
Identities = 163/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||| ||| | |||||||| || ||||||| || || || | || || |||
Sbjct 76607 CCCCCGCGA--GCGAAGCACCAAGTGCAGGGTGGACTTTTCCTGAATCCTGTAGTCTGAG 76550
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| |||| | | || || || || || || | || | ||| |||||
Sbjct 76549 AGAGTGCGGCCATCCTCTATCCGTTTGCCTGCAAAAATCAGACACTGCTAGTCAGGTGGG 76490
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTAC 68413
||||||||||||||||| || || | ||||| ||| ||||||| |||| | ||
Sbjct 76489 ATGCCTTCCTTGTCTTGGATTTTAGATTTGACATTCTCAGTGGTGTC-ACTGAGCTTAAC 76431
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| ||||| || || || |||||||| || | ||||||||
Sbjct 76430 CTCAAGGGTTATGGTCTTGCCTGTCAGGGTCTTCACAGAGATCTGCAT 76383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920553640583840
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