Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq20608 122 2e-22 >seq20608 Length=25523 Score = 122 bits (134), Expect = 2e-22 Identities = 296/440 (67%), Gaps = 14/440 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 ||||| ||||| || | ||| |||||||| ||||| ||| ||| | || | Sbjct 9630 CTGGCTTTCTTTGCAACAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGTGTTTTAGC 9571 Query 42483 AAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 |||| || ||| ||| || || | ||| ||||| |||||||| || ||||| || | Sbjct 9570 CAAGAAGTTCAGATTACA--GAAGCCCTCTGTTTCTATGGCTTCCAAATTGCCATGGAAA 9513 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCG 42597 || | | ||||| ||| | || |||| |||| ||||| ||| || | Sbjct 9512 ACATACGTTCTGAAATGTTT---AGTCTCCTCATTGACACTTACATTAAGGACTCCAAAG 9456 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 | | || || ||||| ||||| |||| |||||| | | ||||||||||| || | Sbjct 9455 AAAGGAAATTTCTCTTCAATGCCATTGAGATGATGCCTCGTGTAAAGAAGAAGGCAGATT 9396 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||| | ||||| | ||| | || || || | || || | ||||||||||| Sbjct 9395 GGGCTTTGCCTTGGATTG-GAGACAAAGAGGCTACCTGTGGAGAACGTGTGGTAGCCTTT 9337 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA- 42775 | | || || || |||||||| || || | || || || || |||||||||||| | Sbjct 9336 GCTACGGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTCAAGAAT 9277 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 |||| ||| |||| || ||||| || || || ||||| || ||||| || | || | Sbjct 9276 CAAGGACTCG-TGCCTGGTCTCACATTTTCCAATGAACTTATTAGCAGAGATAAAGGTTT 9218 Query 42836 GCATAGGGACTTTGCCTGCC 42855 || | ||||||||||||| Sbjct 9217 ACACTGTGACTTTGCCTGCC 9198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943244097046720