Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq58932 118 3e-22 >seq58932 Length=406 Score = 118 bits (130), Expect = 3e-22 Identities = 206/299 (69%), Gaps = 3/299 (1%) Strand=Plus/Plus Query 32680 TCTTTGAATTTCTCAACAAGCAGATCACGAAATTCGTTAGCCATTTCTTCCTGCACCGCT 32739 |||| |||||| ||| | ||||||||||| ||||| | || |||| |||| || | Sbjct 75 TCTTCGAATTTATCAGCCAGCAGATCACGGAATTCCTGGGCGATTTGCTCCTCCAGTTTT 134 Query 32740 TCCAGCTGAATAATGCGCAGAACCAGTACAGGACGATCGCCA---GTGATAATGCTGAGG 32796 ||| |||||| ||| ||||| ||||| ||||| ||| ||| || | || |||| Sbjct 135 TCCTGCTGAACAATACGCAGTACCAGCACAGGTACATCACCACCGGTCAGAACGCTGTAA 194 Query 32797 CGTAATTTAAACGGACGTTCTTTCAGGCCTTCAAACGGAACGCATTTAAATTCAAATGCC 32856 || | ||| | | |||||| ||| | || | || ||| |||| | ||| | Sbjct 195 CGCAGTTTGATAGCACGTTCAGACAGTTCATCGTATGGTGTGCAGGTAAACTGGAATACT 254 Query 32857 ACTGGCATAATGTCTTTGGTTTTCGCTTCGACAGACTCCATCAGAGAGCGTTTGCCGCTG 32916 | ||||| | ||| | |||||||||| || ||||||| |||||| || ||| | Sbjct 255 GCAGGCATGACGTCACGGCTTTTCGCTTCCACGCTTTCCATCACAGAGCGCTTAGCGCCG 314 Query 32917 AAGTCATTATCTTCAAAATCAGCGGTCTGGTTCGCTTCAATCGTGATTTTACGGACCGC 32975 || ||| | |||||| ||| |||| || | ||||| || |||||||| || || || Sbjct 315 AAATCACTGTCTTCATGATCTGCGGAGCGGCTTGCTTCGATGGTGATTTTGCGTACAGC 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150179969138712