Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq50076 116 8e-22 seq59308 91.5 3e-14 seq31977 84.2 5e-12 >seq50076 Length=581 Score = 116 bits (128), Expect = 8e-22 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 20222 GTGCCGATGTGGTACCCGGACTATGACGGGATCTACTGGGCCGATGGCCGCACCCTGGAC 20281 ||||||||||||||||||||||||||||| | |||||||| |||| ||| || ||||| Sbjct 99 GTGCCGATGTGGTACCCGGACTATGACGGCCTGTACTGGGCAGATGCCCGTACACTGGAT 158 Query 20282 GCCGAGGGCGGCGACTACCAGGTGATCGAGAACCTGCGCATTGCCTACAAGGTGGCGCG 20340 | |||||||| || || |||| || ||||| |||||||| | |||| |||||||| Sbjct 159 GTTGAGGGCGGTGATTATCAGGCTATTGAGAATCTGCGCATCGTTGACAAAGTGGCGCG 217 >seq59308 Length=399 Score = 91.5 bits (100), Expect = 3e-14 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 676 ACCGCATCTTCCAGGTGGTCGGGGGCGAAGTGGGCATAGCGCATCGTCATCTTGATGTCG 735 |||||||| | || || || || || ||||| ||||| ||||| ||||| || || || Sbjct 300 ACCGCATCATTAAGATGATCCGGTGCAAAGTGTGCATAACGCATAGTCATTTTAATATCT 359 Query 736 GTGTGGCCGAGGATGCGCTGTAGCACCAGGATGTTGCCGC 775 || || |||||||||||||| |||||||| ||||| |||| Sbjct 360 GTATGCCCGAGGATGCGCTGAAGCACCAGAATGTTACCGC 399 >seq31977 Length=6145 Score = 84.2 bits (92), Expect = 5e-12 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23928 CGAGCTGCTCAAGCGCCCGGGCGCCGCCCTGCAGTTGGCGGGGGCCATTAACGAGCAGTT 23987 ||| ||||| | | ||||| ||||| ||||| | || | | | || || |||| Sbjct 58 CGAACTGCTGGAACTGCCGGGAGCCGCATTGCAGATTGCAACGACAGTGAATGACCAGTA 117 Query 23988 CGCCCCCACCCTGGAAATCACCGTAAAAAACTGACCGCGCGCGCCGAGGCCATCGAGCGC 24047 ||| || | ||||| |||| ||||||||||| || || || | || || || || ||| Sbjct 118 CGCACCGAAACTGGATATCAGCGTAAAAAACTAACAGCACGGGTTGATGCGATTGATCGC 177 Query 24048 AATCCCCTGGAGCAGGTGCTGGCGCTGCGGCGCTACTACCTGCCCCATGAAGAGGACGA 24106 |||| ||||| |||| | || ||||| ||| ||||| | || ||||| | ||||| Sbjct 178 AATCATCTGGAACAGGCGGCAGCACTGCGCCGCCACTACTTCCCGCATGATAACGACGA 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108510725418808