Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_009542.2
Length=33985
Score E
Sequences producing significant alignments: (Bits) Value
seq50076 116 8e-22
seq59308 91.5 3e-14
seq31977 84.2 5e-12
>seq50076
Length=581
Score = 116 bits (128), Expect = 8e-22
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 20222 GTGCCGATGTGGTACCCGGACTATGACGGGATCTACTGGGCCGATGGCCGCACCCTGGAC 20281
||||||||||||||||||||||||||||| | |||||||| |||| ||| || |||||
Sbjct 99 GTGCCGATGTGGTACCCGGACTATGACGGCCTGTACTGGGCAGATGCCCGTACACTGGAT 158
Query 20282 GCCGAGGGCGGCGACTACCAGGTGATCGAGAACCTGCGCATTGCCTACAAGGTGGCGCG 20340
| |||||||| || || |||| || ||||| |||||||| | |||| ||||||||
Sbjct 159 GTTGAGGGCGGTGATTATCAGGCTATTGAGAATCTGCGCATCGTTGACAAAGTGGCGCG 217
>seq59308
Length=399
Score = 91.5 bits (100), Expect = 3e-14
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 676 ACCGCATCTTCCAGGTGGTCGGGGGCGAAGTGGGCATAGCGCATCGTCATCTTGATGTCG 735
|||||||| | || || || || || ||||| ||||| ||||| ||||| || || ||
Sbjct 300 ACCGCATCATTAAGATGATCCGGTGCAAAGTGTGCATAACGCATAGTCATTTTAATATCT 359
Query 736 GTGTGGCCGAGGATGCGCTGTAGCACCAGGATGTTGCCGC 775
|| || |||||||||||||| |||||||| ||||| ||||
Sbjct 360 GTATGCCCGAGGATGCGCTGAAGCACCAGAATGTTACCGC 399
>seq31977
Length=6145
Score = 84.2 bits (92), Expect = 5e-12
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 23928 CGAGCTGCTCAAGCGCCCGGGCGCCGCCCTGCAGTTGGCGGGGGCCATTAACGAGCAGTT 23987
||| ||||| | | ||||| ||||| ||||| | || | | | || || ||||
Sbjct 58 CGAACTGCTGGAACTGCCGGGAGCCGCATTGCAGATTGCAACGACAGTGAATGACCAGTA 117
Query 23988 CGCCCCCACCCTGGAAATCACCGTAAAAAACTGACCGCGCGCGCCGAGGCCATCGAGCGC 24047
||| || | ||||| |||| ||||||||||| || || || | || || || || |||
Sbjct 118 CGCACCGAAACTGGATATCAGCGTAAAAAACTAACAGCACGGGTTGATGCGATTGATCGC 177
Query 24048 AATCCCCTGGAGCAGGTGCTGGCGCTGCGGCGCTACTACCTGCCCCATGAAGAGGACGA 24106
|||| ||||| |||| | || ||||| ||| ||||| | || ||||| | |||||
Sbjct 178 AATCATCTGGAACAGGCGGCAGCACTGCGCCGCCACTACTTCCCGCATGATAACGACGA 236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108510725418808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |