Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 131 4e-25
>seq4400
Length=129001
Score = 131 bits (144), Expect = 4e-25
Identities = 146/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || |||| ||| ||||| || || || | || || || || |||
Sbjct 40087 TCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 40028
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| ||||||||||||||||| || || ||||||||
Sbjct 40027 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTC 39968
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||||| | || || || || ||||| ||||| ||||| || ||||| |||
Sbjct 39967 TCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACG 39908
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 39907 AAGATCTGCATTTTG 39893
Score = 131 bits (144), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || |||| ||| ||||| || || || | || || || || |||
Sbjct 40543 TCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 40484
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || ||||| ||| ||||||||||||||||| || || ||||||
Sbjct 40483 ATGAGCCTCTGCTGG---TCTGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACG 40427
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||||| | || || || || ||||| ||||| ||||| || |||||
Sbjct 40426 TTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 40367
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 40366 ACGAAGATCTGCAT 40353
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || |||| ||| ||||| || || || | || || || || |||
Sbjct 40315 TCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 40256
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| ||||||||||||||||| || || ||||||||
Sbjct 40255 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTC 40196
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||||| | || || || || ||||| ||||| ||||| || ||||| |||
Sbjct 40195 TCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACG 40136
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 40135 AAGATCTGCAT 40125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178252214119416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |