Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq81620 100 3e-16 >seq81620 Length=227 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131374 TATTAAATGTGCTAAAAATTGTTGAATAACTTTTAGCGTGTACTGCTTCCATAAAGGCTA 131433 |||| ||||| ||||||| || || |||||| || || | ||||||||| | Sbjct 227 TATTCAATGTTGAGAAAATTGAAGAGTAGGATTTAGCATGAACAGATTCCATAAACTGAA 168 Query 131434 TGTTATTTAAAACAGCTTCTTCATGTTGTGTTCTTACATCATCAAGTAGTGAGTGTACCC 131493 ||||||||||||||||||||||||| | ||||| | ||| | | | | | || | Sbjct 167 TGTTATTTAAAACAGCTTCTTCATGAGGAGTTCTAATATCCGCTCGGATAGCCTCAACAC 108 Query 131494 CCGATTCTGATTGAACTGTGTCTAATAATGTTAACCCACCAAACACTTTATTTATTAAAT 131553 | | ||| ||||| | || || | ||| |||| |||||||| |||||| | ||||| Sbjct 107 CTGTTTCGGATTGCATAGTATCAAGTAAGGTTAGACCACCAAAAACTTTACCGACTAAAT 48 Query 131554 CTTGCTCCATATCAGATAGCTTTGCCCAATCATTAACATCGTT 131596 ||| || ||| || ||||| ||| |||| | |||||| Sbjct 47 CTTTTTCTTGATCGGAAAGCTTGCGCCAGTCATCCAAATCGTT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453975336291840