Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7134 93.3 4e-14 >seq7134 Length=91468 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||||| | ||||| || | || | | | ||||| || || ||||||||||| Sbjct 86530 GCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 86471 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || || ||||| |||| | |||| | | ||| ||||| || || Sbjct 86470 CAGAGTGCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 86411 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| || || | | || | |||||| | | |||||| Sbjct 86410 GATGCCCTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 86351 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTATAA 138623 ||| | || | || ||||| |||| |||||||| || ||||||| || ||| ||| Sbjct 86350 CTCCAGGGTGATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCATTGTCTTTTAA 86293 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||||| | ||||| || | || | | | |||||||| || ||||||||||| Sbjct 86758 GCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 86699 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || || || || |||| | |||| | | ||| ||||| || || Sbjct 86698 CAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 86639 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| | | |||||| Sbjct 86638 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 86579 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || ||||| |||| || || || || ||||||||| Sbjct 86578 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86530 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||||| | ||||| || | || | | | |||||||| || ||||||||||| Sbjct 86986 GCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 86927 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || || || || |||| | |||| | | ||| ||||| || || Sbjct 86926 CAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 86867 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| | | |||||| Sbjct 86866 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 86807 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || ||||| |||| || || || || ||||||||| Sbjct 86806 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||||| | ||||| || | || | | | ||||| || || ||||||||||| Sbjct 87214 GCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 87155 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||| || || ||||| |||| | |||| | | ||| ||||| || || Sbjct 87154 CAGAGTGCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 87095 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| | | |||||| Sbjct 87094 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 87035 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || ||||| |||| || || || || ||||||||| Sbjct 87034 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495686909307840