Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_011398.1 Length=50930 Score E Sequences producing significant alignments: (Bits) Value seq57556 80.6 9e-11 >seq57556 Length=433 Score = 80.6 bits (88), Expect = 9e-11 Identities = 208/312 (67%), Gaps = 14/312 (4%) Strand=Plus/Minus Query 37474 TTTGCTGATTCAGTAGCATCTTCTGACAATTCAATCCTAGTTGGAGAATTAGCAAAATTG 37533 ||| ||||| ||||| || |||| ||||||| || | |||||||||||| | Sbjct 337 TTTACTGATGCAGTAACAGGAACTGAAGATTCAATTCTTATAAGAGAATTAGCAACTATA 278 Query 37534 CTTAGACAAAATGGAATTGATACAGGACAAAATAGATTATTTGACTGGTTAAGAAATAAT 37593 | | ||||| ||| |||||| |||| |||| ||| |||| | ||| | || | ||| Sbjct 277 TTAAATCAAAAAGGAGTTGATATAGGAGAAAAGAGACTATTCAAATGGATGAGGGAAAAT 218 Query 37594 GGTTACTTAATAAAACGTAAAGGCGAGGATTACAATACACCAACTCAAAAAAGTGTAGAT 37653 || || ||||| ||| | | || ||| | || ||| ||||||||| | ||| Sbjct 217 GGGTATTTAATCAAAAGAGATGGTATAGATAAGAACTTACCTACTCAAAAATCCATGGAT 158 Query 37654 TTAGGAGTTATAGAAACAAAAGAAGGTACAAGAGTACAT-CCAGATGGTCAT--ACAAGT 37710 | | | || ||||| | ||| || |||| | || ||| |||||| || | Sbjct 157 CTTAAATTAATGGAAACTAGGGAATCTATAAGA-CAGATACCA---GGTCATGAACCAAA 102 Query 37711 ATTACTAAA-ACACCTAAGATTACTGGTAAGGGACAAATATACTTTATTAATAAGTT--- 37766 |||| ||| ||| | | ||||| || || || ||||| || || |||||||| || Sbjct 101 GTTACAAAAGACAACAAGAATTACCGGAAAAGGTCAAATTTATTTCATTAATAAATTCTT 42 Query 37767 ---TAAAAAGAA 37775 ||||||||| Sbjct 41 AGGTAAAAAGAA 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162674988600288