Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 131 4e-25
seq7134 118 2e-21
seq19008 96.9 8e-15
seq11308 93.3 1e-13
seq66 93.3 1e-13
seq11706 86.0 1e-11
seq11363 84.2 5e-11
>seq4400
Length=129001
Score = 131 bits (144), Expect = 4e-25
Identities = 160/218 (73%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || |||||||| || |||| |||||| || | | ||| | |||||
Sbjct 40108 AGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40049
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || |||||||| | ||||||||| ||| || |||||| |||
Sbjct 40048 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 39989
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||| || | | || || |||| ||||| |||
Sbjct 39988 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 39929
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || ||||| || ||||| || || || ||||||
Sbjct 39928 TTGCCGGTGAGGGTCTTCACGAAGATCTG---CATTTT 39894
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || ||||| || |||||||| || |||| |||||| || | | ||| | |||||
Sbjct 40565 CAGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATC 40506
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || || |||||||| | ||||||||| ||| || |||||| ||
Sbjct 40505 CTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCTTTATC 40446
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| |||| ||| || | | || || |||| ||||| ||
Sbjct 40445 CTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGT 40386
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 40385 CTTGCCGGTGAGGGTCTTCACGAAGATCTG 40356
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || |||||||| || |||| |||||| || | | ||| | |||||
Sbjct 40336 AGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40277
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || |||||||| | ||||||||| ||| || |||||| |||
Sbjct 40276 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCC 40217
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||| || | | || || |||| ||||| |||
Sbjct 40216 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 40157
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || ||||| || || ||
Sbjct 40156 TTGCCGGTGAGGGTCTTCACGAAGATCTG 40128
>seq7134
Length=91468
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || ||| | || ||
Sbjct 86515 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86456
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || ||| ||
Sbjct 86455 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTC 86396
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 86395 TTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86336
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || | ||||| || || || ||
Sbjct 86335 CTTACCGGTCAACGTTTTTACGAAGATCTG 86306
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || |||||||| |||| ||||||||||| || ||| | || ||
Sbjct 86743 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86684
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| | | ||||||||| || || || || ||
Sbjct 86683 TTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 86624
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 86623 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86564
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || | || ||||| || || ||
Sbjct 86563 CTTACCGGTCAAGGTCTTCACGAAGATCTG 86534
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || |||||||| |||| ||||||||||| || ||| | || ||
Sbjct 86971 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86912
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| | | ||||||||| || || || || ||
Sbjct 86911 TTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 86852
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 86851 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86792
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || | || ||||| || || ||
Sbjct 86791 CTTACCGGTCAAGGTCTTCACGAAGATCTG 86762
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | || ||||| || |||| ||||||||||| || ||| | |||||||
Sbjct 87426 AGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCT 87367
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| ||||| || | ||||||||| || || || || ||
Sbjct 87366 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCA 87307
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || |||| ||||| |||
Sbjct 87306 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 87247
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || | || ||||| || || ||
Sbjct 87246 TTACCGGTCAAGGTCTTCACGAAGATCTG 87218
Score = 109 bits (120), Expect = 1e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || || ||||| || |||| ||||||||||| || ||| | || ||
Sbjct 87199 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 87140
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 87139 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 87080
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 87079 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 87020
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || | || ||||| || || ||
Sbjct 87019 CTTACCGGTCAAGGTCTTCACGAAGATCTG 86990
>seq19008
Length=48258
Score = 96.9 bits (106), Expect = 8e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||| ||||| |||||||| ||| | ||||||||||| | ||||||||||| ||||||
Sbjct 12709 CGAAATCTCAACACAAGGTGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 12650
Query 199469 CTTCCATCTTCCAGCTGCTTTCC 199491
| |||||||||||||||||| ||
Sbjct 12649 CATCCATCTTCCAGCTGCTTGCC 12627
Score = 87.8 bits (96), Expect = 4e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 200947 GGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACT 201006
|| |||||| ||||||||||| | |||||| | || |||||| | || || ||||||| |
Sbjct 12627 GGCAAGCAGCTGGAAGATGGATGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTATT 12686
Query 201007 CTTCACCTTGTTTTGAGACTTCG 201029
||||||||||| |||||| ||||
Sbjct 12687 CTTCACCTTGTGTTGAGATTTCG 12709
>seq11308
Length=60846
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/118 (78%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||||| |||| || ||||| ||||||||||| | ||||||||| | ||||| |
Sbjct 52890 AGTCTCAATGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGA-AAAGTATGT 52832
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||| |||||||||||| || || ||||| || | ||||| || ||| ||||||||
Sbjct 52831 CCATTTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 52774
>seq66
Length=542294
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | || |||| | |||| |||||||||| || ||| |||||||
Sbjct 261610 AGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAACAGAGTGTGTCCATCT 261669
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || || ||||| | | ||||||||| || || || || ||
Sbjct 261670 TCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCT 261729
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || |||| ||||| |||
Sbjct 261730 TGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 261789
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || |||||||| || ||
Sbjct 261790 TTACCGGTCAGGGTCTTCACAAAGATCTG 261818
>seq11706
Length=58367
Score = 86.0 bits (94), Expect = 1e-11
Identities = 152/220 (69%), Gaps = 5/220 (2%)
Strand=Plus/Minus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
|||||| | | ||| || | || ||||||||||| | ||||||||||| ||||||
Sbjct 34767 AAGTCTGAATATAAGATGAAAAGCAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATG 34708
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCT----GCTGGTCCGGAAAAATTC 199526
|||||||||||||| || || || ||||| || | | ||| | ||| |||||
Sbjct 34707 TCCATCTTCCAGCTAATTGCCAGCAAAGATCAGTCAGTCTTCACTGTTTAGGAGGAATTC 34648
Query 199527 CTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
|||| ||||||||||| || || ||| ||||| | ||| || || |
Sbjct 34647 CTTCCTTATCCTGAATCTTGGTTTTTAC-ATTTCTGTTGTGTCCAAGGGTTCAACCTCGA 34589
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || ||||||| ||||| ||
Sbjct 34588 GAGTGATGGTCTTCCCGGTAAGGGTTTTCATGAAAATCTG 34549
>seq11363
Length=60480
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | ||||||||||| |||||| | ||||||||||||||| || || || ||||
Sbjct 1631 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGCTGTTTGCCAGCAAAGA 1690
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || | ||||| || ||| |||||||
Sbjct 1691 TCAGTCTTTGCTGATCAGGAGGAATTCCT 1719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177520285155724
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