Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1881 188 3e-42
seq17588 140 1e-27
seq3881 114 5e-20
seq13417 105 3e-17
seq8290 89.7 2e-12
seq773 86.0 2e-11
>seq1881
Length=198091
Score = 188 bits (208), Expect = 3e-42
Identities = 462/693 (67%), Gaps = 13/693 (2%)
Strand=Plus/Plus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977
|||| ||||||||||| ||||||| || ||||| ||||| | ||| | || || || |
Sbjct 78964 TTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCACGGGAAAGTGG 79023
Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037
|||| || || ||||| || ||| ||||| || || | || ||||| |||
Sbjct 79024 AAATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTTGCCTTTACTGATA 79083
Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAACACA 451096
| ||| || | | || | ||||| || | | | | | | | || ||| |||||
Sbjct 79084 CCGAATGATTGATCGGTGATGCTGCAAAGAACCAAGTTGCAATGAACC-CCACTAACACG 79142
Query 451097 GTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAG 451156
|| | |||||| || ||| | || || |||| | |||||||| | ||| ||| |||
Sbjct 79143 GTTTTTGATGCCAAGCGTCTTATAGGACGTAGATTTGATGATGCTGTTGTCCAATCAGAT 79202
Query 451157 AAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGT 451212
| || ||| | ||| ||| || || ||| | ||| | |||| | | |||||
Sbjct 79203 ATGAAGCATTGGCCCTTC--ATGGTG--GTGAATGATGCAGGCAGGCCCAAGGTCCAAGT 79258
Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272
| || || || || || |||| ||| ||| || || | |||||||||||| | ||
Sbjct 79259 GGAATACAAGGGAGAGACAAAAAGTTTCTATCCAGAGGAGGTGTCATCTATGGTTTTGAC 79318
Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332
|||||||| |||| |||||| ||| | || | ||||| |||| || | ||
Sbjct 79319 AAAAATGAAGGAAATTGCAGAAGCTTATCTAGGGAAGACTGTTACCAATGCTGTTGTCAC 79378
Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392
||| || |||||||||||||| | || | || ||||| |||||||| ||| ||||||
Sbjct 79379 TGTACCTGCTTATTTCAATGACTCTCAGCATCAGGCAACCAAAGATGCTGGAACTATTGC 79438
Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
|||| | ||||| || | || || ||||| || || || |||||| || ||||| |
Sbjct 79439 TGGTCTCAATGTACTCAGGATCATCAATGAGCCAACTGCTGCTGCTACTGCTTATGGCTT 79498
Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512
|| || ||| | || |||| || | | | ||||| || || || || ||
Sbjct 79499 AGACAA---AAAGGTTGGAGCTGAAAGGAACGTGCTTATCTTTGACTTAGGAGGTGGCAC 79555
Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572
| |||| || | || | ||||||||||| | ||||| || || | || |||
Sbjct 79556 TTTTGATGTGTCCATCCTCACTATTGAAGATGGAATCTTTGAGGTCAAATCTACAGCTGG 79615
Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || || |||| || |||||| |||| ||
Sbjct 79616 AGACACCCACTTAGGTGGAGAAGATTTTGACAA 79648
>seq17588
Length=70272
Score = 140 bits (154), Expect = 1e-27
Identities = 261/382 (68%), Gaps = 6/382 (2%)
Strand=Plus/Minus
Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301
|||| ||||| |||| | ||||| ||| |||||||| |||| |||||| | |||
Sbjct 32849 CTCCACAAGAACTTTCTGCAATGGTACTTCAAAAAATGAAGCAAACTGCAGAAGACTATT 32790
Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361
| || ||| || || || |||||||| ||||| || |||||| || ||||||
Sbjct 32789 TAGGACAAGAAGTAACAGAGGCTGTAATTACAGTTCCTGCATATTTCTCAGACTCACAAC 32730
Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421
| ||||| || ||||| || || || ||||| ||| | | || || |||||||| |
Sbjct 32729 GTCAAGCTACAAAAGAGGCTGGTCAAATTGCAGGTCTTGAGGTGAAACGTATTATTAACG 32670
Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481
||||||| || |||||||| || || || | | ||||||| | || ||| |||
Sbjct 32669 AACCTACTGCTGCTGCTCTTGCTTACGGTGTTGAAAAATCAGATCAAG-AGATGAAGG-- 32613
Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541
|| || ||||| ||||||| || ||| ||||| || | || ||| |
Sbjct 32612 ---TTGCTGTGTTTGACCTTGGTGGTGGTACTTTTGATATCTCAATTCTAGACTTTGGTG 32556
Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601
| || || |||||||| | || |||||||||||||| |||| || || ||| |||
Sbjct 32555 ACGGTGTGTTTGAAGTTCTATCTACTAATGGTGATACTCACTTAGGTGGAGATGATTTTG 32496
Query 451602 ATAATGCAATTGTGGAATGGTT 451623
| | | ||| | || |||||
Sbjct 32495 ACCAAGTTATTATTGACTGGTT 32474
Score = 91.5 bits (100), Expect = 6e-13
Identities = 243/370 (66%), Gaps = 16/370 (4%)
Strand=Plus/Minus
Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047
|| || || ||||| | ||||| | |||||||| || |||| ||| || ||||
Sbjct 32097 GTTAACCCAGATGAGGTAGTTGCTTTAGGTGCTGCTGTACAAGGTGCTGTTTTAAC---- 32042
Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107
||| |||| ||| | | |||| |||| ||||||| ||||| || | ||
Sbjct 32041 -----TGACGAAATTAAAGGTGTTGTTCTATTAG---ATGTAACTCCTCTTTCATTAGGT 31990
Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167
|||| ||| ||||| | |||||||| | ||| | ||| |||||||||||
Sbjct 31989 ATTGAGACACTAGGTGGTGTAATGACTAAACTTATTGATGCTAACACTACTATTCCTTGT 31930
Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227
|| || | |||| || ||||| ||||||||| ||| ||||| ||||| |||
Sbjct 31929 AAGAAAGCTGAAACTTTCTCAACAGCGGCAGATAACCAAACAGAGGTAACAATTCATGTG 31870
Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTA--GGAGAATTTACTCTTT 452285
|| |||| ||| | ||||| | | |||| |||||| || | || | ||
Sbjct 31869 CTTCAAGGTGAAAGACCAATGGCCAACCAAAATA--AAACTATTGGTAATTTCAACCTAA 31812
Query 452286 CAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345
|| ||| ||||| | | || | ||||||||||||| | | | |||| ||||||
Sbjct 31811 CAGGTATTGCTCCTGCACAGCGTGGTATTCCTCAAATTGAAGTAAGTTTTGATATTGATG 31752
Query 452346 CAAATGGTAT 452355
| || |||||
Sbjct 31751 CTAACGGTAT 31742
>seq3881
Length=138185
Score = 114 bits (126), Expect = 5e-20
Identities = 198/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || || ||||| || || ||||||||||| ||||| | || |||||||| ||||
Sbjct 63912 ATGCTGTGATCACTGTGCCAGCCTATTTCAATGACTCACAATGACAGGCAACTAAGGATG 63971
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
|||| ||||| ||| | ||||| || ||||||| ||||| || ||||| |||||
Sbjct 63972 CAGGCGTGATTGCAGGTCTCAATGTGCTAAGAATTATCAATGAGCCCACAGCTGCTGCCA 64031
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499
| || ||||| ||| ||| | || | ||| | || | | | |||||
Sbjct 64032 TTGCCTATGGCTTAGATAAAGC---AGGTCAGGGAGAGCGACATGTCCTGATCTTTGACC 64088
Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559
|||||||||| || |||| || | || | || || |||||| | ||||| ||||
Sbjct 64089 TTGGTGGAGGCACATTTGATGTGTCCATCCTCACCATAGATGATGGGATTTTTGAGGTAA 64148
Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606
|||| || ||| || || || || || || || || |||| |||
Sbjct 64149 AGGCCACAGCTGGGGACACCCACCTGGGTGGAGAGGACTTTGACAAT 64195
>seq13417
Length=55113
Score = 105 bits (116), Expect = 3e-17
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| |||||||| ||||||| || || |||||||||||||| ||||| || |||||
Sbjct 20620 GTTACCCATGCAGTAGTTACTGTACCAGCCTATTTCAATGATGCTCAACGCCAGGCAACC 20561
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| || |||||| | | || || ||||| ||
Sbjct 20560 AAAGATGCTGGAACTATTGCTGGATTGAATGTTATGAGGATAATCAATGAGCC 20508
>seq8290
Length=81352
Score = 89.7 bits (98), Expect = 2e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423
|| || ||||| ||||| || || || |||| ||||||| ||||| | |||||||||
Sbjct 75783 CAGGCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTGATTAATGAA 75724
Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467
|| ||||| |||||||| || ||||| |||| |||||| ||||
Sbjct 75723 CCCACAGCTGCTGCTCTGGCCTATGGCCTAGACAAATCAGAAGA 75680
>seq773
Length=283014
Score = 86.0 bits (94), Expect = 2e-11
Identities = 168/246 (68%), Gaps = 7/246 (3%)
Strand=Plus/Plus
Query 96048 ATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA-- 96105
||||||| | |||||||||||| || || || ||||| ||| || | || | ||
Sbjct 140300 ATGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAAT 140357
Query 96106 GGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165
||||||||| |||||| ||| |||| || || ||| | | ||| |||||| |
Sbjct 140358 GGATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAG 140417
Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225
|||||| || || | ||||||||||||||||||| || ||||| || |
Sbjct 140418 ACAAATGCTGCCATTACTGTTAATATTTGGATGATAAAT---TCTTGTAAATGCAACCTC 140474
Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTC 96285
||| || || | || |||||| ||||||| |||| || |||||| || || |
Sbjct 140475 AGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCGCCTTG 140534
Query 96286 ATAGGG 96291
||| ||
Sbjct 140535 ATATGG 140540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1973369979611376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |